RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 CENPMQ9NSP4 180 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 TAS2R14Q9NYV8 317 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 ANKMY1Q9P2S6 941 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 POLLQ9UGP5 575 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 LEF1Q9UJU2 399 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 TMED5Q9Y3A6 229 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 FAM96BQ9Y3D0 163 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 ASXL1Q8IXJ9 1541 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 XIRP1Q702N8 1843 aaKnown RBP3.09□□□□□ -1.92
DEPDC1-204ENST00000489862 NRXN1Q9ULB1 1477 aa3.09□□□□□ -1.92
DEPDC1-204ENST00000489862 ARPC4-TTLL3A0A0A6YYG9 625 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 A0A0G2JPF8 293 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CFAP73A6NFT4 308 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ANKDD1BA6NHY2 528 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CCDC169A6NNP5 214 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 HNRNPCL3B7ZW38 293 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 MCIDASD6RGH6 385 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 RASGRF2O14827 1237 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ADAM12O43184 909 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ATG13O75143 517 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF217O75362 1048 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ICAM1P05362 532 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ENO1P06733 434 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 HNRNPCL4P0DMR1 293 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF182P17025 639 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 MATN1P21941 496 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 GLRA2P23416 452 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 GPTP24298 496 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 NR2F2P24468 414 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 MPZP25189 248 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 NMBRP28336 390 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PTPN4P29074 926 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CCR1P32246 355 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SOX6P35712 828 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 MTIF2P46199 727 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 OR1G1P47890 313 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ALDH7A1P49419 539 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CLCN5P51795 746 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 GPR143P51810 404 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SH3BGRP55822 239 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 FOLH1Q04609 750 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 GPM6BQ13491 265 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 KCTD21Q4G0X4 260 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 FAM98BQ52LJ0 330 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SOWAHCQ53LP3 525 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 HERC4Q5GLZ8 1057 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 DCAF12L2Q5VW00 463 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PM20D1Q6GTS8 502 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 WBP2NLQ6ICG8 309 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CLEC2AQ6UVW9 174 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PRSS55Q6UWB4 352 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 GSTA5Q7RTV2 222 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PIGWQ7Z7B1 504 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 IGFN1Q86VF2 1251 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 DDIASQ8IXT1 998 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 APCDD1Q8J025 514 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 KDM8Q8N371 416 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM199Q8N511 208 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 HUS1BQ8NHY5 278 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 WDR20Q8TBZ3 569 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 COG3Q96JB2 828 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SPATA33Q96N06 139 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SEPT5Q99719 369 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF559Q9BR84 538 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 RTN4RQ9BZR6 473 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 KCNK15Q9H427 330 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SRD5A3Q9H8P0 318 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 RPF1Q9H9Y2 349 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 WDR6Q9NNW5 1121 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 MKKSQ9NPJ1 570 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ENTPD7Q9NQZ7 604 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 THSD1Q9NS62 852 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SPG21Q9NZD8 308 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 DNAJB4Q9UDY4 337 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 AGO2Q9UKV8 859 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CDC14AQ9UNH5 594 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SLC8A2Q9UPR5 921 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PLEKHA6Q9Y2H5 1048 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 IQGAP1P46940 1657 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 TTC41PQ6P2S7 1318 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SETD1AO15047 1707 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 POLR1AO95602 1720 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM94Q12767 1356 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PLEKHH1Q9ULM0 1364 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PPLO60437 1756 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 DDTLA6NHG4 134 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 F8WDY8 70 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PLK4O00444 970 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PTGESO14684 152 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 STRNO43815 780 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CCNT1O60563 726 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CYTIPO60759 359 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 MTX2O75431 263 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 MT-CYBP00156 380 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ASGR1P07306 291 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ANKRD34CP0C6C1 535 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 AREGP15514 252 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 UGT1A6P19224 532 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 HNRNPA2B1P22626 353 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 TCEA1P23193 301 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms