RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ZBTB14O43829 449 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 NRP2O60462 931 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 SYF2O95926 243 aaKnown RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 EBLN1P0CF75 366 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 CDH3P22223 829 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 TNFRSF8P28908 595 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 RBMS1P29558 406 aaKnown RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 PHBP35232 272 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 SPRP35270 261 aaPredicted RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 TSPAN7P41732 249 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 RGS4P49798 205 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 PMS2P54278 862 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 ERVPABLB-1P60509 514 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 VSNL1P62760 191 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 HSD11B2P80365 405 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 MC2RQ01718 297 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 POU4F1Q01851 419 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 NAB1Q13506 487 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 COL9A2Q14055 689 aaPredicted RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 SLMAPQ14BN4 828 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 UAP1Q16222 522 aaPredicted RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 SUSD1Q6UWL2 747 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 SBSNQ6UWP8 590 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 CLEC14AQ86T13 490 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 LRRC56Q8IYG6 542 aaPredicted RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 LSMEM2Q8N112 164 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 MYO1HQ8N1T3 1032 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 D2HGDHQ8N465 521 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 FBXO15Q8NCQ5 510 aaPredicted RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 HMGCLL1Q8TB92 370 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 MAGEC3Q8TD91 643 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 OR6C1Q96RD1 312 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 CYTH2Q99418 400 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 SLC12A9Q9BXP2 914 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 GPAMQ9HCL2 828 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 FAM60AQ9NP50 221 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 C1GALT1Q9NS00 363 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 SLC39A1Q9NY26 324 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 AKAP7Q9P0M2 348 aaPredicted RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 CHD8Q9HCK8 2581 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 LAMA5O15230 3695 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 NPEPPSL1A6NEC2 478 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 E7ENX8 843 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 NVLO15381 856 aaKnown RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 TIAF1O95411 115 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 ZBTB11O95625 1053 aaPredicted RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 C8GP07360 202 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 CTSBP07858 339 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 SLC35E2BP0CK96 405 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 STMN1P16949 149 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 ZNF28P17035 718 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 MAGP20916 626 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 GCAP28676 217 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 IMPA1P29218 277 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 CSRP3P50461 194 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 TAP2Q03519 686 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 FOXM1Q08050 763 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 DLG1Q12959 904 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 SLC29A2Q14542 456 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 NAA30Q147X3 362 aaPredicted RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 KIR2DS3Q14952 304 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 GPR19Q15760 415 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 PPP1R3AQ16821 1122 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 ERCC6LQ2NKX8 1250 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 MROH9Q5TGP6 573 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 KIAA1614Q5VZ46 1190 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 LRRC8EQ6NSJ5 796 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 CDHR3Q6ZTQ4 885 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 EIF1ADQ8N9N8 165 aaKnown RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 OR2A1Q8NGT9 310 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 DCAKDQ8WVC6 231 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 SNRNP27Q8WVK2 155 aaKnown RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 SLC44A1Q8WWI5 657 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 FGF11Q92914 225 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 PDLIM5Q96HC4 596 aaKnown RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 NAF1Q96HR8 494 aaKnown RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 ZNF578Q96N58 590 aaPredicted RBP7.58□□□□□ -1.2
SSR1-210ENST00000489567 TAAR9Q96RI9 348 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 PAFAH2Q99487 392 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 ACAT2Q9BWD1 397 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 RAB11FIP5Q9BXF6 653 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 PARVBQ9HBI1 364 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 PRM3Q9NNZ6 103 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 FBXO8Q9NRD0 319 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 THSD1Q9NS62 852 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 SPATA7Q9P0W8 599 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 ZMIZ1Q9ULJ6 1067 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 BTRCQ9Y297 605 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 PCDHGA7Q9Y5G6 932 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 PCDHGA3Q9Y5H0 932 aa7.58□□□□□ -1.2
SSR1-210ENST00000489567 A0A087WUV0 522 aaPredicted RBP7.57□□□□□ -1.2
SSR1-210ENST00000489567 A0A0J9YY10 115 aa7.57□□□□□ -1.2
SSR1-210ENST00000489567 TEX51A0A1B0GUA7 166 aa7.57□□□□□ -1.2
SSR1-210ENST00000489567 TMEM8BA6NDV4 472 aa7.57□□□□□ -1.2
SSR1-210ENST00000489567 POC1B-GALNT4F8VUJ3 575 aa7.57□□□□□ -1.2
SSR1-210ENST00000489567 POLR1CO15160 346 aaPredicted RBP7.57□□□□□ -1.2
SSR1-210ENST00000489567 KDM1AO60341 852 aa7.57□□□□□ -1.2
SSR1-210ENST00000489567 ALDOAP04075 364 aaKnown RBP7.57□□□□□ -1.2
SSR1-210ENST00000489567 ABHD2P08910 425 aa7.57□□□□□ -1.2
SSR1-210ENST00000489567 CCDC166P0CW27 439 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms