RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 ALPPP05187 535 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 CTSBP07858 339 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 PIM1P11309 404 aaPredicted RBP12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 NMBRP28336 390 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 MAGEA6P43360 314 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 SRSF1Q07955 248 aaKnown RBP eCLIP12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 GRM7Q14831 915 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 SF1Q15637 639 aaKnown RBP12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 NADK2Q4G0N4 442 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 DCAF10Q5QP82 559 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 JMJD6Q6NYC1 403 aaPredicted RBP12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 FIGLAQ6QHK4 219 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 LMNTD1Q8N9Z9 388 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 COL26A1Q96A83 441 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 MFSD3Q96ES6 412 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 ZNF285Q96NJ3 590 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 BIRC8Q96P09 236 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 IL17FQ96PD4 163 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 SLC26A1Q9H2B4 701 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 SYBUQ9NX95 663 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 IL1RAPL1Q9NZN1 696 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 SPATA7Q9P0W8 599 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 TTC7AQ9ULT0 858 aaPredicted RBP12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 SOX13Q9UN79 622 aa12.55□□□□□ -0.4
ATPAF2-207ENST00000488753 FITM1A5D6W6 292 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 A6NL46 340 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 SRPX2O60687 465 aaPredicted RBP12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 IPO13O94829 963 aaKnown RBP12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 OGNP20774 298 aaKnown RBP12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 MGAT1P26572 445 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 KCNJ1P48048 391 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 EIF3BP55884 814 aaKnown RBP12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 SOX8P57073 446 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 GBX1Q14549 363 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 KCNJ11Q14654 390 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 MYBPC3Q14896 1274 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 NAA25Q14CX7 972 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 CTSL3PQ5NE16 218 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 FCRL6Q6DN72 434 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 KIAA0930Q6ICG6 404 aaPredicted RBP12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 OVCH1Q7RTY7 1134 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 LRRC8AQ8IWT6 810 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 FAM20CQ8IXL6 584 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 C2orf73Q8N5S3 287 aaPredicted RBP12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 PRELID2Q8N945 189 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 LPGAT1Q92604 370 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 PNPLA2Q96AD5 504 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 WDR54Q9H977 334 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 SLC22A11Q9NSA0 550 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 P4HTMQ9NXG6 502 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 NXT1Q9UKK6 140 aaKnown RBP12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 VPS9D1Q9Y2B5 631 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 KLHL20Q9Y2M5 609 aa12.54□□□□□ -0.4
ATPAF2-207ENST00000488753 MAGEB16A2A368 324 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 DSCR3O14972 297 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 CNOT3O75175 753 aaKnown RBP12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 MATN4O95460 622 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 UMODP07911 640 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 MLNP12872 115 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 PAMP19021 973 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 ALAS2P22557 587 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 MMP11P24347 488 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 GRIA3P42263 894 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 CYP2A13Q16696 494 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 FAM214AQ32MH5 1076 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 SLC6A19Q695T7 634 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 IGFL3Q6UXB1 125 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 TTLL10Q6ZVT0 673 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 PPP1R32Q7Z5V6 425 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 CILP2Q8IUL8 1156 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 GALNT16Q8N428 558 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 OTUD6BQ8N6M0 293 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 RBMXL3Q8N7X1 1067 aaKnown RBP12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 TTC29Q8NA56 475 aaPredicted RBP12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 OR2L3Q8NG85 312 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 SKA2Q8WVK7 121 aaPredicted RBP12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 TM9SF4Q92544 642 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 SELENOSQ9BQE4 189 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 SLAMF7Q9NQ25 335 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 CUTCQ9NTM9 273 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 INTS10Q9NVR2 710 aaKnown RBP12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 NFS1Q9Y697 457 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 FAM169AQ9Y6X4 670 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 MED13Q9UHV7 2174 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 DOPEY2Q9Y3R5 2298 aa12.53□□□□□ -0.4
ATPAF2-207ENST00000488753 RP1L1Q8IWN7 2480 aaPredicted RBP12.52□□□□□ -0.4
ATPAF2-207ENST00000488753 FAM237BA0A1B0GVD1 139 aa12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 TCRBV7S3A2A0A539 114 aa12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 AGPSO00116 658 aa12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 ERGP11308 486 aa12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 ITGAXP20702 1163 aa12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 FMO4P31512 558 aa12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 CXCR5P32302 372 aa12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 BDKRB1P46663 353 aa12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 AIMP2Q13155 320 aaKnown RBP12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 SLC9A5Q14940 896 aa12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 ARHGAP19Q14CB8 494 aa12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 INPP5JQ15735 1006 aaPredicted RBP12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 NEPROQ6NW34 567 aa12.52□□□□□ -0.41
ATPAF2-207ENST00000488753 CES3Q6UWW8 571 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms