RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 HOXD8P13378 290 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 ITPKAP23677 461 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 RPP38P78345 283 aaKnown RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 NKX3-2P78367 333 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 LRIT3Q3SXY7 679 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 FAM171A1Q5VUB5 890 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 AGAP7PQ5VUJ5 663 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 ADGRG2Q8IZP9 1017 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 C7orf57Q8NEG2 295 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 ATG10Q9H0Y0 220 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 LRTM1Q9HBL6 345 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 TRIM39Q9HCM9 518 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 PLSCR3Q9NRY6 295 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 ANKMY1Q9P2S6 941 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 OGDHLQ9ULD0 1010 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 FCF1Q9Y324 198 aaKnown RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 PDCD11Q14690 1871 aaKnown RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 TYW5A2RUC4 315 aaKnown RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 SLC25A14O95258 325 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 KRT75O95678 551 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 STSP08842 583 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 BCKDHAP12694 445 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 HLA-DPA1P20036 260 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 SLC6A4P31645 630 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 BMPR1AP36894 532 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 FCGRTP55899 365 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 NXNL2Q5VZ03 156 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 CPZQ66K79 652 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 GDF6Q6KF10 455 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 TCAIMQ8N3R3 496 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 NKAPQ8N5F7 415 aaKnown RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 SPATA17Q96L03 361 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 ZNF300Q96RE9 604 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 CEP44Q9C0F1 390 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 RNF38Q9H0F5 515 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 CRISPLD1Q9H336 500 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 MTX2O75431 263 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 GBAP04062 536 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 MSH3P20585 1137 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 CYP2C18P33260 490 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 S100A3P33764 101 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 MXD1Q05195 221 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 DMC1Q14565 340 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 DEPDC1Q5TB30 811 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 DEPDC4Q8N2C3 294 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 SPPL2AQ8TCT8 520 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 PYURFQ96I23 114 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 NEDD4LQ96PU5 975 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 COPS4Q9BT78 406 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 KAT8Q9H7Z6 458 aaKnown RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 NEK6Q9HC98 313 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 PRDM5Q9NQX1 630 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 DCAF13Q9NV06 445 aaKnown RBP12.08□□□□□ -0.48
HSPG2-211ENST00000486901 TMEM184CQ9NVA4 438 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 C1orf109Q9NX04 203 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 ERVK-11Q9UQG0 969 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 TPRKBQ9Y3C4 175 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 RFXANKO14593 260 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 SLC22A1O15245 554 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 INSIG1O15503 277 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 TLL1O43897 1013 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 RFPL2O75678 378 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 PRLP01236 227 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 MZF1P28698 734 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-211ENST00000486901 SLC35A2P78381 396 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 AFMIDQ63HM1 303 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 CD300LGQ6UXG3 332 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 SELENOMQ8WWX9 145 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 BTBD2Q9BX70 525 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 TMEM121BQ9BXQ6 578 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-211ENST00000486901 TMEM248Q9NWD8 314 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 ADPRHL2Q9NX46 363 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 RHCGQ9UBD6 479 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 OPTCQ9UBM4 332 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 GABRQQ9UN88 632 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 H3BM21 787 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 TAPBPO15533 448 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 LPOP22079 712 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-211ENST00000486901 HOXC13P31276 330 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 GNPDA1P46926 289 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 ZNF140P52738 457 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-211ENST00000486901 SMARCB1Q12824 385 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 MTA1Q13330 715 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 TPRG1LQ5T0D9 272 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 CACHD1Q5VU97 1274 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 LRRC66Q68CR7 880 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 AFTPHQ6ULP2 937 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 HIPK1Q86Z02 1210 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 RHOXF1Q8NHV9 184 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 ZNF641Q96N77 438 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-211ENST00000486901 TLR8Q9NR97 1041 aaKnown RBP12.07□□□□□ -0.48
HSPG2-211ENST00000486901 RLIMQ9NVW2 624 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 B3GNT3Q9Y2A9 372 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 TLR6Q9Y2C9 796 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 SLC26A3P40879 764 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 EIF2DP41214 584 aaKnown RBP12.07□□□□□ -0.48
HSPG2-211ENST00000486901 ARHGDIAP52565 204 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 MRPS6P82932 125 aaKnown RBP12.07□□□□□ -0.48
HSPG2-211ENST00000486901 ZNF33AQ06730 810 aa12.07□□□□□ -0.48
HSPG2-211ENST00000486901 MED22Q15528 200 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms