RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 IPMKQ8NFU5 416 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 OR2W6PQ8NHA6 318 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 UHMK1Q8TAS1 419 aaKnown RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 CLIP3Q96DZ5 547 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 MRGPRX2Q96LB1 330 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 TAAR6Q96RI8 345 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 APOL2Q9BQE5 337 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 POLR1EQ9GZS1 481 aaKnown RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 LRRC40Q9H9A6 602 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 DLL4Q9NR61 685 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 POT1Q9NUX5 634 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 P4HTMQ9NXG6 502 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 SUCOQ9UBS9 1254 aaKnown RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 CHMP2BQ9UQN3 213 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 WDR37Q9Y2I8 494 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 AAR2Q9Y312 384 aaKnown RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 FLNAP21333 2647 aaKnown RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 ABCA4P78363 2273 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.49□□□□□ -0.89
SND1-213ENST00000486037 PDZK1P1A8MUH7 402 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 GPR37O15354 613 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 IPO13O94829 963 aaKnown RBP9.49□□□□□ -0.89
SND1-213ENST00000486037 ACSL3O95573 720 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 TTC4O95801 387 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 AGTP01019 485 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 NUDT17P0C025 328 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 MGAT1P26572 445 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 CA7P43166 264 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 WNT3AP56704 352 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 SOX8P57073 446 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 SESN2P58004 480 aaPredicted RBP9.49□□□□□ -0.89
SND1-213ENST00000486037 GPX6P59796 221 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 HSD11B2P80365 405 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 SARNPP82979 210 aaKnown RBP9.49□□□□□ -0.89
SND1-213ENST00000486037 MPP3Q13368 585 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 SLC29A2Q14542 456 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 PCSK7Q16549 785 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 DNAJC21Q5F1R6 531 aaKnown RBP9.49□□□□□ -0.89
SND1-213ENST00000486037 ALS2CLQ60I27 953 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 DENND5AQ6IQ26 1287 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 FAM180AQ6UWF9 173 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 RPTNQ6XPR3 784 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 PPP1R32Q7Z5V6 425 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 NLRP8Q86W28 1048 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 BBS5Q8N3I7 341 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 ACBD4Q8NC06 268 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 OR1L3Q8NH93 324 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 CHTF18Q8WVB6 975 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 MTFMTQ96DP5 389 aaKnown RBP9.49□□□□□ -0.89
SND1-213ENST00000486037 FER1L6-AS2Q96M78 137 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 PPP1R2P1Q96PQ5 205 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 SMR3AQ99954 134 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 TBL1YQ9BQ87 522 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 TRIM56Q9BRZ2 755 aaKnown RBP9.49□□□□□ -0.89
SND1-213ENST00000486037 OR2AG1Q9H205 316 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 PLAC1Q9HBJ0 212 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 SYBUQ9NX95 663 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 RPH3AQ9Y2J0 694 aaPredicted RBP9.49□□□□□ -0.89
SND1-213ENST00000486037 PPIL1Q9Y3C6 166 aa9.49□□□□□ -0.89
SND1-213ENST00000486037 NSD1Q96L73 2696 aaPredicted RBP9.49□□□□□ -0.89
SND1-213ENST00000486037 AKAP6Q13023 2319 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 ANK3Q12955 4377 aaKnown RBP9.48□□□□□ -0.89
SND1-213ENST00000486037 TLCD2A6NGC4 264 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 CLDN7O95471 211 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 ABHD2P08910 425 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 TPH1P17752 444 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 MST1P26927 711 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 SSTR1P30872 391 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 CHRNA4P43681 627 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 ARCN1P48444 511 aaKnown RBP9.48□□□□□ -0.89
SND1-213ENST00000486037 ARL4DP49703 201 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 IST1P53990 364 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 CSNK1G2P78368 415 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 CRADDP78560 199 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 LTBQ06643 244 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 ZNF844Q08AG5 666 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 FOXD4Q12950 439 aaPredicted RBP9.48□□□□□ -0.89
SND1-213ENST00000486037 CCDC38Q502W7 563 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 HENMT1Q5T8I9 393 aaKnown RBP9.48□□□□□ -0.89
SND1-213ENST00000486037 LRIG3Q6UXM1 1119 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 GFRALQ6UXV0 394 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 RANBP10Q6VN20 620 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 CAPN12Q6ZSI9 719 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 USP45Q70EL2 814 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 LINC00523Q86TU6 105 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 ZNF547Q8IVP9 402 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 BCORP1Q8N888 145 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 PYROXD1Q8WU10 500 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 LRRC39Q96DD0 335 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 CFAP36Q96G28 342 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 TTC25Q96NG3 672 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 GBP5Q96PP8 586 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 NUDCD1Q96RS6 583 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 EBNA1BP2Q99848 306 aaKnown RBP9.48□□□□□ -0.89
SND1-213ENST00000486037 RMI1Q9H9A7 625 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 FAM53CQ9NYF3 392 aa9.48□□□□□ -0.89
SND1-213ENST00000486037 NUP210LQ5VU65 1888 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 STAB1Q9NY15 2570 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 NBEAL1Q6ZS30 2694 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 LOC285095A0A1B0GVY8 99 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms