RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 C18orf21Q32NC0 220 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-213ENST00000485530 LGSNQ5TDP6 509 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 FBXO38Q6PIJ6 1188 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 WDR74Q6RFH5 385 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-213ENST00000485530 SLITRK4Q8IW52 837 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 FAM20CQ8IXL6 584 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 PPFIBP2Q8ND30 876 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 OR10G6Q8NH81 332 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 KIAA1191Q96A73 305 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 MTBPQ96DY7 904 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 OR2A14Q96R47 310 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 GFM1Q96RP9 751 aaKnown RBP11.83□□□□□ -0.52
TRA2B-213ENST00000485530 ROPN1BQ9BZX4 212 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-213ENST00000485530 NRSN2Q9GZP1 204 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 RAB33BQ9H082 229 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 STN1Q9H668 368 aaKnown RBP11.83□□□□□ -0.52
TRA2B-213ENST00000485530 ROPN1Q9HAT0 212 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-213ENST00000485530 EVA1BQ9NVM1 165 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 UTP6Q9NYH9 597 aaKnown RBP11.83□□□□□ -0.52
TRA2B-213ENST00000485530 EPHA6Q9UF33 1036 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 LGALS13Q9UHV8 139 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 TLK1Q9UKI8 766 aa11.83□□□□□ -0.52
TRA2B-213ENST00000485530 KNTC1P50748 2209 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 IQANK1A0A1B0GTG1 560 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 PMS2P1A4D2B8 440 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 D6RAR5 112 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 E7ENX8 843 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 CAPN5O15484 640 aaPredicted RBP11.82□□□□□ -0.52
TRA2B-213ENST00000485530 TAPBPO15533 448 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 PRAMEF10O60809 474 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 CDH16O75309 829 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 ERLIN1O75477 346 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 CPNE6O95741 557 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 SYF2O95926 243 aaKnown RBP11.82□□□□□ -0.52
TRA2B-213ENST00000485530 RPN2P04844 631 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 MPOP05164 745 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 CHRM5P08912 532 aaPredicted RBP11.82□□□□□ -0.52
TRA2B-213ENST00000485530 MTHFD2P13995 350 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 CREB1P16220 341 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 TFEBP19484 476 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 IMPA1P29218 277 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 PRDX3P30048 256 aaKnown RBP11.82□□□□□ -0.52
TRA2B-213ENST00000485530 CAPZBP47756 277 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 GLRBP48167 497 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 RAB28P51157 221 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 TAP2Q03519 686 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 TARDBPQ13148 414 aaKnown RBP eCLIP11.82□□□□□ -0.522e-7■□□□□ 9.9
TRA2B-213ENST00000485530 HES3Q5TGS1 186 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 LRRC8EQ6NSJ5 796 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 TMEM71Q6P5X7 295 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 SUSD1Q6UWL2 747 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 CDHR3Q6ZTQ4 885 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 ARHGAP22Q7Z5H3 698 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 LURAP1LQ8IV03 231 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 SPACA3Q8IXA5 215 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 DCBLD1Q8N8Z6 715 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 OR4D9Q8NGE8 314 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 OR2L8Q8NGY9 312 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 HMGCLL1Q8TB92 370 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 MCOLN3Q8TDD5 553 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 AHCYL2Q96HN2 611 aaKnown RBP11.82□□□□□ -0.52
TRA2B-213ENST00000485530 TGM7Q96PF1 710 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 ATOH8Q96SQ7 321 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 SEMA4CQ9C0C4 833 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 C12orf65Q9H3J6 166 aaKnown RBP11.82□□□□□ -0.52
TRA2B-213ENST00000485530 ALG9Q9H6U8 611 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 SYNDIG1Q9H7V2 258 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 PPCSQ9HAB8 311 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 OR6C2Q9NZP2 312 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 TMEM216Q9P0N5 145 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 STOX2Q9P2F5 926 aaPredicted RBP11.82□□□□□ -0.52
TRA2B-213ENST00000485530 NOVA2Q9UNW9 492 aaKnown RBP11.82□□□□□ -0.52
TRA2B-213ENST00000485530 PTPN13Q12923 2485 aa11.82□□□□□ -0.52
TRA2B-213ENST00000485530 IGHV5-51A0A0C4DH38 117 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 A8MU76 341 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 TARM1B6A8C7 271 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 AGPSO00116 658 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 AGRPO00253 132 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 BRINP1O60477 761 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 GUCA1CO95843 209 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 MT-ND3P03897 115 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 PSMB5P28074 263 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 SHMT2P34897 504 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 PNLIPRP1P54315 467 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 ATP6V0D1P61421 351 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 IFFO1Q0D2I5 559 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 SP140Q13342 867 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 SPIDRQ14159 915 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 CASP8Q14790 479 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 TGFBIQ15582 683 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 ISXQ2M1V0 245 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 TAF1BQ53T94 588 aaPredicted RBP11.81□□□□□ -0.52
TRA2B-213ENST00000485530 FBXO48Q5FWF7 155 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 TNFAIP8L3Q5GJ75 292 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 C16orf46Q6P387 395 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 TTC23LQ6PF05 361 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 FAM92BQ6ZTR7 304 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 TAOK1Q7L7X3 1001 aa11.81□□□□□ -0.52
TRA2B-213ENST00000485530 TBC1D1Q86TI0 1168 aaPredicted RBP11.81□□□□□ -0.52
TRA2B-213ENST00000485530 TRIM73Q86UV7 250 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms