RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CREG1O75629 220 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 SEC31AO94979 1220 aaKnown RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 MATN4O95460 622 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 KLK3P07288 261 aaPredicted RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 MCM3P25205 808 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 ATP5DP30049 168 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 RORAP35398 523 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 CCNFP41002 786 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 CCR10P46092 362 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 RPL21P46778 160 aaKnown RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 POLE2P56282 527 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 YBX1P67809 324 aaKnown RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 MC1RQ01726 317 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 NFATC3Q12968 1075 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 SLC9A5Q14940 896 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 HIF1AQ16665 826 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 TTLL9Q3SXZ7 439 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 RBM20Q5T481 1227 aaKnown RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 C1orf189Q5VU69 101 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 FCRL6Q6DN72 434 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 TRMT10BQ6PF06 316 aaKnown RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 PIWIL4Q7Z3Z4 852 aaKnown RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 LMNTD2Q8IXW0 634 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 SYTL1Q8IYJ3 562 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 GPR135Q8IZ08 494 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 DSELQ8IZU8 1212 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 DNAJC22Q8N4W6 341 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 ZNF655Q8N720 491 aaPredicted RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 C2CD4AQ8NCU7 369 aaPredicted RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 CD200R1Q8TD46 325 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 CERS2Q96G23 380 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 AARSD1Q9BTE6 412 aaKnown RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 ACAT2Q9BWD1 397 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 RAB11FIP5Q9BXF6 653 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 SYTL2Q9HCH5 934 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 ABCF3Q9NUQ8 709 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 ZC3H7BQ9UGR2 993 aaKnown RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 PCSK5Q92824 1860 aa11.82□□□□□ -0.52
MSH5-216ENST00000484309 GCN1Q92616 2671 aaKnown RBP11.82□□□□□ -0.52
MSH5-216ENST00000484309 SPTA1P02549 2419 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 A0A1W2PPV9 198 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 C21orf140B9A014 251 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 TP73O15350 636 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 PRICKLE3O43900 615 aaPredicted RBP11.81□□□□□ -0.52
MSH5-216ENST00000484309 VPS26AO75436 327 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 PSIP1O75475 530 aaKnown RBP11.81□□□□□ -0.52
MSH5-216ENST00000484309 TTC4O95801 387 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 SYF2O95926 243 aaKnown RBP11.81□□□□□ -0.52
MSH5-216ENST00000484309 CATP04040 527 aaKnown RBP11.81□□□□□ -0.52
MSH5-216ENST00000484309 MSL3P1P0C860 447 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 CBSLP0DN79 551 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 GABRB3P28472 473 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 PTPN4P29074 926 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 CBSP35520 551 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 PGGT1BP53609 377 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 ARL4CP56559 192 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 RPS15P62841 145 aaKnown RBP11.81□□□□□ -0.52
MSH5-216ENST00000484309 PDIA2Q13087 525 aaKnown RBP11.81□□□□□ -0.52
MSH5-216ENST00000484309 IL10RAQ13651 578 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 FASTKD3Q14CZ7 662 aaKnown RBP11.81□□□□□ -0.52
MSH5-216ENST00000484309 FIGLAQ6QHK4 219 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 FAM198BQ6UWH4 519 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 SUSD1Q6UWL2 747 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 CAPN12Q6ZSI9 719 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 RAB42Q8N4Z0 105 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 ENDOVQ8N8Q3 282 aaKnown RBP11.81□□□□□ -0.52
MSH5-216ENST00000484309 PPFIBP2Q8ND30 876 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 OR9A1PQ8NGU1 263 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 MAGEC3Q8TD91 643 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 KCNJ9Q92806 393 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 INPP5DQ92835 1189 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 SLC22A18Q96BI1 424 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 CATSPER2Q96P56 530 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 PKP4Q99569 1192 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 NAT9Q9BTE0 207 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 STARD5Q9NSY2 213 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 EURLQ9NYK6 297 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 SPATA7Q9P0W8 599 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 DHCR7Q9UBM7 475 aaKnown RBP11.81□□□□□ -0.52
MSH5-216ENST00000484309 RNF14Q9UBS8 474 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 TRMT6Q9UJA5 497 aaKnown RBP11.81□□□□□ -0.52
MSH5-216ENST00000484309 PLCL2Q9UPR0 1127 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 DHRS7Q9Y394 339 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 PCDHGA6Q9Y5G7 932 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 MRFAP1Q9Y605 127 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 TEX264Q9Y6I9 313 aa11.81□□□□□ -0.52
MSH5-216ENST00000484309 H3BMH7 237 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 ZSCAN9O15535 394 aaPredicted RBP11.8□□□□□ -0.52
MSH5-216ENST00000484309 RAD51CO43502 376 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 AHSGP02765 367 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 MPC1LP0DKB6 136 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 CDKN2DP55273 166 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 ETF1P62495 437 aaKnown RBP11.8□□□□□ -0.52
MSH5-216ENST00000484309 TIAL1Q01085 375 aaKnown RBP eCLIP11.8□□□□□ -0.52
MSH5-216ENST00000484309 KCNAB2Q13303 367 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 ZNF517Q6ZMY9 492 aaPredicted RBP11.8□□□□□ -0.52
MSH5-216ENST00000484309 FBXO36Q8NEA4 188 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 SPATA4Q8NEY3 305 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 OR2L3Q8NG85 312 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 LRFN5Q96NI6 719 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms