RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SYT13Q7L8C5 426 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 GALNT13Q8IUC8 556 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 DCUN1D3Q8IWE4 304 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 FBXW8Q8N3Y1 598 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 SELENOMQ8WWX9 145 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 BMFQ96LC9 184 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 HBEGFQ99075 208 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 POLMQ9NP87 494 aaPredicted RBP13.62□□□□□ -0.23
CLK3-204ENST00000483723 FZD3Q9NPG1 666 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 NOP53Q9NZM5 478 aaKnown RBP13.62□□□□□ -0.23
CLK3-204ENST00000483723 NDRG2Q9UN36 371 aaKnown RBP13.62□□□□□ -0.23
CLK3-204ENST00000483723 ASF1AQ9Y294 204 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 NDUFAF1Q9Y375 327 aa13.62□□□□□ -0.23
CLK3-204ENST00000483723 POM121BA6NF01 834 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 H0YIV9 168 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 CLGNO14967 610 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 SLC22A3O75751 556 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 PCSK2P16519 638 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 CCND1P24385 295 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 HALP42357 657 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 PNLIPRP1P54315 467 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 UFM1P61960 85 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 MAD2L1Q13257 205 aaPredicted RBP13.61□□□□□ -0.23
CLK3-204ENST00000483723 FZD5Q13467 585 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 DOC2AQ14183 400 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 KPNB1Q14974 876 aaKnown RBP13.61□□□□□ -0.23
CLK3-204ENST00000483723 ARHGAP19Q14CB8 494 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 TRMT5Q32P41 509 aaKnown RBP13.61□□□□□ -0.23
CLK3-204ENST00000483723 IL23RQ5VWK5 629 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 FRG2Q64ET8 278 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 GRHL2Q6ISB3 625 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 SLCO4C1Q6ZQN7 724 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 ZFAND4Q86XD8 727 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 PPFIBP2Q8ND30 876 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 PHC3Q8NDX5 983 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 OR5K2Q8NHB8 316 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 WDR20Q8TBZ3 569 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 PROKR1Q8TCW9 393 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 TEX37Q96LM6 180 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 FRG2BQ96QU4 278 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 ACPTQ9BZG2 426 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 ACTL8Q9H568 366 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 WDR41Q9HAD4 459 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 LRTM1Q9HBL6 345 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 MAP10Q9P2G4 905 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 PCDHGA7Q9Y5G6 932 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 HS3ST3A1Q9Y663 406 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 KCNE2Q9Y6J6 123 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 E7EQ34 232 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 MRASO14807 208 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 ENTPD5O75356 428 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 CIB2O75838 187 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 RSL1D1O76021 490 aaKnown RBP13.61□□□□□ -0.23
CLK3-204ENST00000483723 APBB3O95704 486 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 RPN2P04844 631 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 SLC2A4P14672 509 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 IL9P15248 144 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 GNAZP19086 355 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 CAPN3P20807 821 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 HNRNPA2B1P22626 353 aaKnown RBP13.61□□□□□ -0.23
CLK3-204ENST00000483723 IL12AP29459 219 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 HSD17B2P37059 387 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 DPP6P42658 865 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 ACTR3P61158 418 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 HMGCS1Q01581 520 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 RCAN2Q14206 197 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 MMEL1Q495T6 779 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 PIGGQ5H8A4 983 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 CYP20A1Q6UW02 462 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 Q6ZS52 159 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 CHST15Q7LFX5 561 aaPredicted RBP13.61□□□□□ -0.23
CLK3-204ENST00000483723 RETREG3Q86VR2 466 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 MYLK4Q86YV6 388 aaPredicted RBP13.61□□□□□ -0.23
CLK3-204ENST00000483723 TBC1D21Q8IYX1 336 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 ENDOVQ8N8Q3 282 aaKnown RBP13.61□□□□□ -0.23
CLK3-204ENST00000483723 OR5AR1Q8NGP9 310 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 ROPN1LQ96C74 230 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 MED8Q96G25 268 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 GUCD1Q96NT3 240 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 CDRT15Q96T59 188 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 MENTQ9BUN1 341 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 C1orf50Q9BV19 199 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 EHD1Q9H4M9 534 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 ELOVL6Q9H5J4 265 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 LMAN1LQ9HAT1 526 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 C1orf109Q9NX04 203 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 CIDEBQ9UHD4 219 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 SUFUQ9UMX1 484 aa13.61□□□□□ -0.23
CLK3-204ENST00000483723 A0A1W2PP18 115 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 KANSL1LA0AUZ9 987 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 DYTNA2CJ06 578 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 FAM234BA2RU67 622 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 IFRD1O00458 451 aaPredicted RBP13.6□□□□□ -0.23
CLK3-204ENST00000483723 FPGTO14772 594 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 PI15O43692 258 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 G6PDP11413 515 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 CCR5P51681 352 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 CLCNKAP51800 687 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 NME5P56597 212 aa13.6□□□□□ -0.23
CLK3-204ENST00000483723 PSME3P61289 254 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms