RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 S1PR4O95977 384 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 IGHEP01854 428 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 VARSP26640 1264 aaKnown RBP18.07■□□□□ 0.48
ABCF3-214ENST00000480562 TTPAP49638 278 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 TMED2Q15363 201 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 PCID2Q5JVF3 399 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 IQCKQ8N0W5 287 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 PEX13Q92968 403 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 ATP13A2Q9NQ11 1180 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 INTS7Q9NVH2 962 aaKnown RBP18.07■□□□□ 0.48
ABCF3-214ENST00000480562 ASF1BQ9NVP2 202 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 B3GNT3Q9Y2A9 372 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 NFS1Q9Y697 457 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 TEX15Q9BXT5 2789 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 HIVEP3Q5T1R4 2406 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 AGPSO00116 658 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 ALOX12BO75342 701 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 NMBRP28336 390 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 BDKRB1P46663 353 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 ARSFP54793 590 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 NR6A1Q15406 480 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 SIX1Q15475 284 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-214ENST00000480562 KCTD19Q17RG1 926 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-214ENST00000480562 CCSMST1Q4G0I0 132 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 IGFL3Q6UXB1 125 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 COX15Q7KZN9 410 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 OVCH1Q7RTY7 1134 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 DTWD1Q8N5C7 304 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 METTL27Q8N6F8 245 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-214ENST00000480562 SKA2Q8WVK7 121 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-214ENST00000480562 INPP5DQ92835 1189 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 ILKAPQ9H0C8 392 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-214ENST00000480562 P2RY12Q9H244 342 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 SLC6A20Q9NP91 592 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 TREX1Q9NSU2 369 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 CUTCQ9NTM9 273 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 TSR3Q9UJK0 312 aaKnown RBP18.06■□□□□ 0.48
ABCF3-214ENST00000480562 CDC23Q9UJX2 597 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 FBXL4Q9UKA2 621 aa18.06■□□□□ 0.48
ABCF3-214ENST00000480562 TTC7AQ9ULT0 858 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-214ENST00000480562 A1L4Q6 167 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 DSCR3O14972 297 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 PRICKLE3O43900 615 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-214ENST00000480562 NDUFS3O75489 264 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 ITGA3P26006 1051 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 PSMB5P28074 263 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 OR1D4P47884 311 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 SOX8P57073 446 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 GRM7Q14831 915 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 RPS6KA1Q15418 735 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 NKG7Q16617 165 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 ZC3H12BQ5HYM0 836 aaKnown RBP18.05■□□□□ 0.48
ABCF3-214ENST00000480562 TTC23LQ6PF05 361 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 SHISA6Q6ZSJ9 500 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 OTUD6BQ8N6M0 293 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 GSDMBQ8TAX9 411 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 FKBP10Q96AY3 582 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 RAD51AP1Q96B01 352 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 PANX3Q96QZ0 392 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 SPSB2Q99619 263 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 SELENOSQ9BQE4 189 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 TSGA10Q9BZW7 698 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 CUEDC1Q9NWM3 386 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-214ENST00000480562 GNPTGQ9UJJ9 305 aa18.05■□□□□ 0.48
ABCF3-214ENST00000480562 KLHL41O60662 606 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 CTSVO60911 334 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 IPO13O94829 963 aaKnown RBP18.04■□□□□ 0.48
ABCF3-214ENST00000480562 C1orf105O95561 183 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 ONECUT2O95948 504 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 MMP11P24347 488 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 EIF3BP55884 814 aaKnown RBP18.04■□□□□ 0.48
ABCF3-214ENST00000480562 VSX2P58304 361 aaPredicted RBP18.04■□□□□ 0.48
ABCF3-214ENST00000480562 BASP1P80723 227 aaKnown RBP18.04■□□□□ 0.48
ABCF3-214ENST00000480562 AIMP2Q13155 320 aaKnown RBP18.04■□□□□ 0.48
ABCF3-214ENST00000480562 CCNG2Q16589 344 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 CTSL3PQ5NE16 218 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 MEI1Q5TIA1 1274 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 CES3Q6UWW8 571 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 OTOAQ7RTW8 1153 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 ZADH2Q8N4Q0 377 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 TTC29Q8NA56 475 aaPredicted RBP18.04■□□□□ 0.48
ABCF3-214ENST00000480562 DENND1AQ8TEH3 1009 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 ZNF285Q96NJ3 590 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 MIPEPQ99797 713 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 RAB11FIP5Q9BXF6 653 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 SOX17Q9H6I2 414 aaPredicted RBP18.04■□□□□ 0.48
ABCF3-214ENST00000480562 EIF2B3Q9NR50 452 aaKnown RBP18.04■□□□□ 0.48
ABCF3-214ENST00000480562 CTSFQ9UBX1 484 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 MAU2Q9Y6X3 613 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 UNC79Q9P2D8 2635 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 NOTCH2Q04721 2471 aa18.04■□□□□ 0.48
ABCF3-214ENST00000480562 GOLGA8KD6RF30 607 aa18.03■□□□□ 0.48
ABCF3-214ENST00000480562 GOLGA8TH3BQL2 631 aa18.03■□□□□ 0.48
ABCF3-214ENST00000480562 SOCS6O14544 535 aa18.03■□□□□ 0.48
ABCF3-214ENST00000480562 NRP2O60462 931 aa18.03■□□□□ 0.48
ABCF3-214ENST00000480562 MED26O95402 600 aa18.03■□□□□ 0.48
ABCF3-214ENST00000480562 CBX6O95503 412 aa18.03■□□□□ 0.48
ABCF3-214ENST00000480562 ALBP02768 609 aa18.03■□□□□ 0.48
ABCF3-214ENST00000480562 PIM1P11309 404 aaPredicted RBP18.03■□□□□ 0.48
ABCF3-214ENST00000480562 RPS3P23396 243 aaKnown RBP eCLIP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms