RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 DDX47Q9H0S4 455 aaKnown RBP14.76□□□□□ -0.05
CDK9-203ENST00000480353 FBXO6Q9NRD1 293 aaPredicted RBP14.76□□□□□ -0.05
CDK9-203ENST00000480353 EURLQ9NYK6 297 aa14.76□□□□□ -0.05
CDK9-203ENST00000480353 SPATA7Q9P0W8 599 aa14.76□□□□□ -0.05
CDK9-203ENST00000480353 TLK1Q9UKI8 766 aa14.76□□□□□ -0.05
CDK9-203ENST00000480353 FAM169AQ9Y6X4 670 aa14.76□□□□□ -0.05
CDK9-203ENST00000480353 ZNF462Q96JM2 2506 aa14.76□□□□□ -0.05
CDK9-203ENST00000480353 GCN1Q92616 2671 aaKnown RBP14.76□□□□□ -0.05
CDK9-203ENST00000480353 WISP1O95388 367 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 SYF2O95926 243 aaKnown RBP14.75□□□□□ -0.05
CDK9-203ENST00000480353 CBSLP0DN79 551 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 PIM1P11309 404 aaPredicted RBP14.75□□□□□ -0.05
CDK9-203ENST00000480353 CMPK1P30085 196 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 OTX2P32243 289 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 RPA3P35244 121 aaPredicted RBP14.75□□□□□ -0.05
CDK9-203ENST00000480353 CBSP35520 551 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 FOLR3P41439 243 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 PAFAH1B1P43034 410 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 KLRB1Q12918 225 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 PTK6Q13882 451 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 SLC9A5Q14940 896 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 KLHL38Q2WGJ6 581 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 TCTE1Q5JU00 501 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 LCN10Q6JVE6 187 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 TCTN3Q6NUS6 607 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 FAM198BQ6UWH4 519 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 CENPUQ71F23 418 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 KCNMB4Q86W47 210 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 APLFQ8IW19 511 aaPredicted RBP14.75□□□□□ -0.05
CDK9-203ENST00000480353 DNAJC22Q8N4W6 341 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 NAT8LQ8N9F0 302 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 LMNTD1Q8N9Z9 388 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 FLVCR1-AS1Q8TAF5 88 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 ZUFSPQ96AP4 578 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 RUNDC3BQ96NL0 473 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 SELENOSQ9BQE4 189 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 TRIM56Q9BRZ2 755 aaKnown RBP14.75□□□□□ -0.05
CDK9-203ENST00000480353 SLC25A23Q9BV35 468 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 ING2Q9H160 280 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 KCNF1Q9H3M0 494 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 CLMPQ9H6B4 373 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 DHCR7Q9UBM7 475 aaKnown RBP14.75□□□□□ -0.05
CDK9-203ENST00000480353 COMMD10Q9Y6G5 202 aa14.75□□□□□ -0.05
CDK9-203ENST00000480353 PEX12O00623 359 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 DNALI1O14645 258 aaPredicted RBP14.74□□□□□ -0.05
CDK9-203ENST00000480353 VPS26AO75436 327 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 DNAJB5O75953 348 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 ZIC2O95409 532 aaPredicted RBP14.74□□□□□ -0.05
CDK9-203ENST00000480353 ERVK-10P10266 1014 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 PGAM1P18669 254 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 GRIA3P42263 894 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 SLC1A2P43004 574 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 PTGIRP43119 386 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 PGDP52209 483 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 TLE1Q04724 770 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 CHAF1BQ13112 559 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 GRB7Q14451 532 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 ACSBG2Q5FVE4 666 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 UGT3A1Q6NUS8 523 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 TTLL10Q6ZVT0 673 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 DENND6AQ8IWF6 608 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 KLHL7Q8IXQ5 586 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 PALM2Q8IXS6 379 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 OR9A1PQ8NGU1 263 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 PPANQ9NQ55 473 aaKnown RBP14.74□□□□□ -0.05
CDK9-203ENST00000480353 IARS2Q9NSE4 1012 aaKnown RBP14.74□□□□□ -0.05
CDK9-203ENST00000480353 ABCF3Q9NUQ8 709 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 UTP6Q9NYH9 597 aaKnown RBP14.74□□□□□ -0.05
CDK9-203ENST00000480353 PTRH2Q9Y3E5 179 aaKnown RBP14.74□□□□□ -0.05
CDK9-203ENST00000480353 CCDC88CQ9P219 2028 aa14.74□□□□□ -0.05
CDK9-203ENST00000480353 SEC16AO15027 2179 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 PABPN1LA6NDY0 278 aaKnown RBP14.73□□□□□ -0.05
CDK9-203ENST00000480353 TARM1B6A8C7 271 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 HCRTR1O43613 425 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 CCNDBP1O95273 360 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 MATN4O95460 622 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 TTC4O95801 387 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 NR1D1P20393 614 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 PSMB5P28074 263 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 HSD17B2P37059 387 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 CASRP41180 1078 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 CSRP3P50461 194 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 CUL1Q13616 776 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 GRM7Q14831 915 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 BBS9Q3SYG4 887 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 CCSMST1Q4G0I0 132 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 NKAIN1Q4KMZ8 207 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 HSP90AA5PQ58FG0 334 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 RNASEH2BQ5TBB1 312 aaKnown RBP14.73□□□□□ -0.05
CDK9-203ENST00000480353 THEMIS2Q5TEJ8 643 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 FAM69BQ5VUD6 431 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 CPZQ66K79 652 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 MED25Q71SY5 747 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 TMEM102Q8N9M5 508 aaPredicted RBP14.73□□□□□ -0.05
CDK9-203ENST00000480353 SMPDL3AQ92484 453 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 KCNJ9Q92806 393 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 INPP5DQ92835 1189 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 IP6K3Q96PC2 410 aa14.73□□□□□ -0.05
CDK9-203ENST00000480353 NAPGQ99747 312 aaPredicted RBP14.73□□□□□ -0.05
CDK9-203ENST00000480353 NAT9Q9BTE0 207 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms