RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 CAPN13Q6MZZ7 669 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 GUSBP11Q6P575 273 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 LCTLQ6UWM7 567 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 SPRED1Q7Z699 444 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 RAB44Q7Z6P3 723 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 OOSP2Q86WS3 158 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 SYTL1Q8IYJ3 562 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 ANKRD42Q8N9B4 389 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 OR6Y1Q8NGX8 325 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 RAB3IL1Q8TBN0 382 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 RHBDD1Q8TEB9 315 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 CCDC74AQ96AQ1 378 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 CNDP2Q96KP4 475 aaKnown RBP12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 IL17FQ96PD4 163 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 TMEM237Q96Q45 408 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 CDC6Q99741 560 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 ERVK-6Q9BXR3 956 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 CD244Q9BZW8 370 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 PCBD2Q9H0N5 130 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 CCDC177Q9NQR7 707 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 FTSJ1Q9UET6 329 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 EPHA6Q9UF33 1036 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 CIDEBQ9UHD4 219 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 HEATR5BQ9P2D3 2071 aa12.14□□□□□ -0.47
TRAPPC12-218ENST00000479897 IGHV1OR21-1A0A087WYE8 117 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 K7EPI3 171 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 E2F3O00716 465 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 SH3BP5O60239 455 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 TRIM13O60858 407 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 H2AFYO75367 372 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 UBXN7O94888 489 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 LDOC1O95751 146 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 CHRM5P08912 532 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 CHN1P15882 459 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 IMPDH1P20839 514 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 KCNA4P22459 653 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 OAS2P29728 719 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 PEBP1P30086 187 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 ALDH3A1P30838 453 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 PIK3CGP48736 1102 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 DAB2P98082 770 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 PCDH1Q08174 1060 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 NAE1Q13564 534 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 FASTKQ14296 549 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 ZNF678Q5SXM1 525 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 HHATQ5VTY9 493 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 C10orf107Q8IVU9 208 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 NETO1Q8TDF5 533 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 ZNF483Q8TF39 744 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 SETD7Q8WTS6 366 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 SREK1Q8WXA9 508 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 RSC1A1Q92681 617 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 SLC22A18Q96BI1 424 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 PHF21BQ96EK2 531 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 TBC1D10AQ9BXI6 508 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 SLC32A1Q9H598 525 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 XKR8Q9H6D3 395 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 KCNK4Q9NYG8 393 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 OGFRQ9NZT2 677 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 PCTPQ9UKL6 214 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 ASB1Q9Y576 335 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 WDR87Q6ZQQ6 2873 aa12.13□□□□□ -0.47
TRAPPC12-218ENST00000479897 MN1Q10571 1320 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 PIPSLA2A3N6 862 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 PCNX2A6NKB5 2137 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 C2orf74A8MZ97 194 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 BTN3A3O00478 584 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 TNFSF14O43557 240 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 DUX1O43812 170 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 GFRA3O60609 400 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 SIX3O95343 332 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 PROS1P07225 676 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 FGF3P11487 239 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 EEF1DP29692 281 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 SERPINB5P36952 375 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 HSPA7P48741 367 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 ACADVLP49748 655 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 AGTR2P50052 363 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 PRKAA1Q13131 559 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 E2F2Q14209 437 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 SLC5A12Q1EHB4 618 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 C18orf21Q32NC0 220 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 PERM1Q5SV97 790 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 PRAMEF13Q5VWM6 474 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 FRMD7Q6ZUT3 714 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 EFL1Q7Z2Z2 1120 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 GLRX5Q86SX6 157 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 ZNF761Q86XN6 746 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 CARFQ8N187 725 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 PPFIBP2Q8ND30 876 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 OR4E2Q8NGC2 313 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 OR10G6Q8NH81 332 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 WDR48Q8TAF3 677 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 FLVCR1-AS1Q8TAF5 88 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 FAM76AQ8TAV0 307 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 IFI44Q8TCB0 444 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 JPH3Q8WXH2 748 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 NRTNQ99748 197 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 MIPEPQ99797 713 aa12.12□□□□□ -0.47
TRAPPC12-218ENST00000479897 DPYSL5Q9BPU6 564 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms