RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 FBXL8Q96CD0 374 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 SCMH1Q96GD3 660 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 KLHL15Q96M94 604 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 LRRC3BQ96PB8 259 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 BBS4Q96RK4 519 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 SPZ1Q9BXG8 430 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 DDX31Q9H8H2 851 aaKnown RBP4.55□□□□□ -1.68
VPS50-214ENST00000477935 GKN1Q9NS71 199 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 PPP1R14DQ9NXH3 145 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 ASB3Q9Y575 518 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 PCDHGA1Q9Y5H4 931 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 ATG2BQ96BY7 2078 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 NEDD4P46934 1319 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 TEX13CA0A0J9YWL9 993 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 CCDC196A0A1B0GTZ2 297 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 ERICH2A1L162 156 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 FAM149AA5PLN7 773 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 NPIPB11E5RHQ5 1161 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 TMEM189-UBE2V1I3L0A0 370 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 TSPAN4O14817 238 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 BCAT2O15382 392 aaPredicted RBP4.54□□□□□ -1.68
VPS50-214ENST00000477935 ZIC3O60481 467 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 ERLIN2O94905 339 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 AGR2O95994 175 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 ETFAP13804 333 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 SFNP31947 248 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 GNAQP50148 359 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 PEX5P50542 639 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 TUBP50607 506 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 ROR1Q01973 937 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 DLG1Q12959 904 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 SNTA1Q13424 505 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 DRP2Q13474 957 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 PDGFRLQ15198 375 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 EFNB3Q15768 340 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 BAK1Q16611 211 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 XKR3Q5GH77 459 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 SPSB3Q6PJ21 355 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 ZC3HC1Q86WB0 502 aaKnown RBP4.54□□□□□ -1.68
VPS50-214ENST00000477935 PLA2G4DQ86XP0 818 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 LSMEM2Q8N112 164 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 ESX1Q8N693 406 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 SCCPDHQ8NBX0 429 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 DUX5Q96PT3 197 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 LGMNQ99538 433 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 EIF2AK1Q9BQI3 630 aaKnown RBP4.54□□□□□ -1.68
VPS50-214ENST00000477935 ZNF577Q9BSK1 485 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 GLT8D2Q9H1C3 349 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 ZNF556Q9HAH1 456 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 FBRSL1Q9HCM7 1045 aaKnown RBP4.54□□□□□ -1.68
VPS50-214ENST00000477935 WASH6PQ9NQA3 447 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 MMP17Q9ULZ9 603 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 CDC14AQ9UNH5 594 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 THADAQ6YHU6 1953 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 DOCK5Q9H7D0 1870 aa4.54□□□□□ -1.68
VPS50-214ENST00000477935 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 MYH6P13533 1939 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 IFITM10A6NMD0 228 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 ZNF217O75362 1048 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 GAGE7O76087 117 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 B3GAT3O94766 335 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 MT-CYBP00156 380 aaPredicted RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 GAGE12FP0CL80 117 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 GAGE12GP0CL81 117 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 GAGE12IP0CL82 117 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 COX7A2P14406 83 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 GJA1P17302 382 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 XBP1P17861 261 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 CD58P19256 250 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 AGAP20933 346 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 HNRNPH1P31943 449 aaKnown RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 ERVFC1-1P60608 527 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 SETQ01105 290 aaPredicted RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 PRKCEQ02156 737 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 POU5F1BQ06416 359 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 CCDC173Q0VFZ6 552 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 TWF1Q12792 350 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 GAGE1Q13065 139 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 GAGE4Q13068 117 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 RNPS1Q15287 305 aaKnown RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 HIST2H2ACQ16777 129 aaPredicted RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 IMMTQ16891 758 aaKnown RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 PRICKLE4Q2TBC4 344 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 SLC9B1Q4ZJI4 515 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 SGO1Q5FBB7 561 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 PPP6R3Q5H9R7 873 aaPredicted RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 EOGTQ5NDL2 527 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 CPLX2Q6PUV4 134 aaKnown RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 CLEC18BQ6UXF7 455 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 B3GNT6Q6ZMB0 384 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 ITIH5Q86UX2 942 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 MARCH9Q86YJ5 346 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 TDRPQ86YL5 185 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 DHX40Q8IX18 779 aaKnown RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 SLC35F3Q8IY50 421 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 ZCCHC9Q8N567 271 aaKnown RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 RDM1Q8NG50 284 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 PRPF31Q8WWY3 499 aaKnown RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 PSPC1Q8WXF1 523 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms