RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TGFBIQ15582 683 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 NKAIN2Q5VXU1 208 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 ARMC6Q6NXE6 501 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 SH2D5Q6ZV89 423 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 LMNTD1Q8N9Z9 388 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 OR2L8Q8NGY9 312 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 RHEBL1Q8TAI7 183 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 CCDC138Q96M89 665 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 IQCGQ9H095 443 aaKnown RBP14.84□□□□□ -0.03
SEC13-215ENST00000477547 MRPL46Q9H2W6 279 aaKnown RBP14.84□□□□□ -0.03
SEC13-215ENST00000477547 ACBD3Q9H3P7 528 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 LRRN3Q9H3W5 708 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 RDH14Q9HBH5 336 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 ZNF446Q9NWS9 450 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 NUDT4Q9NZJ9 180 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 OR6C2Q9NZP2 312 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 CD274Q9NZQ7 290 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 LNPEPQ9UIQ6 1025 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 ZNF839A8K0R7 811 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 SYCE1LA8MT33 242 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 D6RAR5 112 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 AGPSO00116 658 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 UBXN8O00124 270 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 B4GAT1O43505 415 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 ANXA5P08758 320 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 CHRM5P08912 532 aaPredicted RBP14.83□□□□□ -0.04
SEC13-215ENST00000477547 RBP1P09455 135 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 HSD17B2P37059 387 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 PNLIPRP1P54315 467 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 TBPL1P62380 186 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 SLC18A2Q05940 514 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 PRKAA1Q13131 559 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 TSTA3Q13630 321 aaPredicted RBP14.83□□□□□ -0.04
SEC13-215ENST00000477547 SPIDRQ14159 915 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 ARHGAP19Q14CB8 494 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 C2orf73Q8N5S3 287 aaPredicted RBP14.83□□□□□ -0.04
SEC13-215ENST00000477547 GOLGA6L1Q8N7Z2 621 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 LINC01555Q8NAE3 123 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 PDPRQ8NCN5 879 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 PPFIBP2Q8ND30 876 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 ZNF480Q8WV37 535 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 ATL1Q8WXF7 558 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 NCSTNQ92542 709 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 FBXL8Q96CD0 374 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 GFM1Q96RP9 751 aaKnown RBP14.83□□□□□ -0.04
SEC13-215ENST00000477547 MRPL57Q9BQC6 102 aaKnown RBP14.83□□□□□ -0.04
SEC13-215ENST00000477547 NUDT22Q9BRQ3 303 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 ABCG4Q9H172 646 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 TMBIM4Q9HC24 238 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 WWOXQ9NZC7 414 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 TMEM216Q9P0N5 145 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 CPSF2Q9P2I0 782 aaKnown RBP14.83□□□□□ -0.04
SEC13-215ENST00000477547 DCDC2Q9UHG0 476 aa14.83□□□□□ -0.04
SEC13-215ENST00000477547 ATXN7L1Q9ULK2 861 aaPredicted RBP14.83□□□□□ -0.04
SEC13-215ENST00000477547 APOBEC2Q9Y235 224 aaKnown RBP14.83□□□□□ -0.04
SEC13-215ENST00000477547 MN1Q10571 1320 aaPredicted RBP14.82□□□□□ -0.04
SEC13-215ENST00000477547 KIF26BQ2KJY2 2108 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 PIPSLA2A3N6 862 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 MATN2O00339 956 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 BTN3A3O00478 584 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 MAP2K7O14733 419 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 OPA1O60313 960 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 SPAG7O75391 227 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 CPNE6O95741 557 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 CAPNS1P04632 268 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 POLR2CP19387 275 aaPredicted RBP14.82□□□□□ -0.04
SEC13-215ENST00000477547 CD1CP29017 333 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 CCT5P48643 541 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 GFERP55789 205 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 PPP1CAP62136 330 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 FASTKQ14296 549 aaKnown RBP14.82□□□□□ -0.04
SEC13-215ENST00000477547 CYP2A13Q16696 494 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 TNFAIP8L3Q5GJ75 292 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 IRGCQ6NXR0 463 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 C16orf46Q6P387 395 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 AGTRAPQ6RW13 159 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 CDHR3Q6ZTQ4 885 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 PROSER1Q86XN7 944 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 ADGRF3Q8IZF5 1079 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 CHCHD4Q8N4Q1 142 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 BANPQ8N9N5 519 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 WDR48Q8TAF3 677 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 HMGCLL1Q8TB92 370 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 SMPDL3AQ92484 453 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 ALKBH8Q96BT7 664 aaKnown RBP14.82□□□□□ -0.04
SEC13-215ENST00000477547 MED8Q96G25 268 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 CCDC177Q9NQR7 707 aaPredicted RBP14.82□□□□□ -0.04
SEC13-215ENST00000477547 HRASLS2Q9NWW9 162 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 ACTR10Q9NZ32 417 aa14.82□□□□□ -0.04
SEC13-215ENST00000477547 MDC1Q14676 2089 aaKnown RBP14.81□□□□□ -0.04
SEC13-215ENST00000477547 C2orf74A8MZ97 194 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 NTN3O00634 580 aaPredicted RBP14.81□□□□□ -0.04
SEC13-215ENST00000477547 DYNC1I1O14576 645 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 GFAPP14136 432 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 UGT2B7P16662 529 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 PSMB5P28074 263 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 PEBP1P30086 187 aaKnown RBP14.81□□□□□ -0.04
SEC13-215ENST00000477547 CRHR1P34998 444 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 HNMTP50135 292 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 E2F1Q01094 437 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms