RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 RASAL1O95294 804 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 TFAP2AP05549 437 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 PRPS2P11908 318 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 CDH1P12830 882 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 AMD1P17707 334 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 XPAP23025 273 aaPredicted RBP11.18□□□□□ -0.62
NUP188-205ENST00000477069 ITGB7P26010 798 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 HNRNPFP52597 415 aaKnown RBP11.18□□□□□ -0.62
NUP188-205ENST00000477069 CYP4F3Q08477 520 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 TMEM115Q12893 351 aaPredicted RBP11.18□□□□□ -0.62
NUP188-205ENST00000477069 CCSMST1Q4G0I0 132 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 LIPJQ5W064 366 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 FRG2Q64ET8 278 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 PDE12Q6L8Q7 609 aaKnown RBP11.18□□□□□ -0.62
NUP188-205ENST00000477069 CLHC1Q8NHS4 586 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 FOXJ1Q92949 421 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 ARRDC3Q96B67 414 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 TESCQ96BS2 214 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 FRG2BQ96QU4 278 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 CENPKQ9BS16 269 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 TMEM106CQ9BVX2 250 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 MRPS26Q9BYN8 205 aaKnown RBP11.18□□□□□ -0.62
NUP188-205ENST00000477069 GORASP2Q9H8Y8 452 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 DPP7Q9UHL4 492 aa11.18□□□□□ -0.62
NUP188-205ENST00000477069 PDLIM1O00151 329 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 PLOD2O00469 737 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 TPST1O60507 370 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 ATG13O75143 517 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 PRSS23O95084 383 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 PRNPP04156 253 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 C7P10643 843 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 TACR1P25103 407 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 SOX11P35716 441 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 PREPP48147 710 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 GZMMP51124 257 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 POLE2P56282 527 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 ZNF33BQ06732 778 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 CHIT1Q13231 466 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 E2F2Q14209 437 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 ACOX1Q15067 660 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 FAM78AQ5JUQ0 283 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 C12orf76Q8N812 135 aaPredicted RBP11.17□□□□□ -0.62
NUP188-205ENST00000477069 TMIEQ8NEW7 156 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 OR52E4Q8NGH9 312 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 DNAJB8Q8NHS0 232 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 SMG7Q92540 1137 aaKnown RBP11.17□□□□□ -0.62
NUP188-205ENST00000477069 NSMCE2Q96MF7 247 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 OR4K3Q96R72 315 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 C9orf16Q9BUW7 83 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 C8orf4Q9NR00 106 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 STOX2Q9P2F5 926 aaPredicted RBP11.17□□□□□ -0.62
NUP188-205ENST00000477069 OAZ3Q9UMX2 235 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 REV3LO60673 3130 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 MYOCOSA0A1B0GUC4 107 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 ST8SIA6P61647 398 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 PLIN5Q00G26 463 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 ABRQ12979 859 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 CSTF3Q12996 717 aaKnown RBP11.17□□□□□ -0.62
NUP188-205ENST00000477069 HNRNPA1L2Q32P51 320 aaKnown RBP11.17□□□□□ -0.62
NUP188-205ENST00000477069 GTDC1Q4AE62 458 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 BCL7AQ4VC05 210 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 TMTC4Q5T4D3 741 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 ISLR2Q6UXK2 745 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 RBM23Q86U06 439 aaKnown RBP11.17□□□□□ -0.62
NUP188-205ENST00000477069 THOC6Q86W42 341 aaKnown RBP11.17□□□□□ -0.62
NUP188-205ENST00000477069 CALHM3Q86XJ0 350 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 NPAS3Q8IXF0 933 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 AADATQ8N5Z0 425 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 METTL25Q8N6Q8 603 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 OR56A3Q8NH54 315 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 C11orf24Q96F05 449 aaPredicted RBP11.17□□□□□ -0.62
NUP188-205ENST00000477069 ZFYVE19Q96K21 471 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 CCDC138Q96M89 665 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 ASB16Q96NS5 453 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 OR52E6Q96RD3 313 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 CPPED1Q9BRF8 314 aaPredicted RBP11.17□□□□□ -0.62
NUP188-205ENST00000477069 WRAP53Q9BUR4 548 aaKnown RBP11.17□□□□□ -0.62
NUP188-205ENST00000477069 KCNH6Q9H252 994 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 CARS2Q9HA77 564 aaKnown RBP11.17□□□□□ -0.62
NUP188-205ENST00000477069 CROCCQ5TZA2 2017 aa11.17□□□□□ -0.62
NUP188-205ENST00000477069 E7EQ34 232 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 UPK1AO00322 258 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 PGM3O95394 542 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 ANXA6P08133 673 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 PCSK2P16519 638 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 ZNF765Q7L2R6 523 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 SATL1Q86VE3 508 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 SFTPA1Q8IWL2 248 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 RNF175Q8N4F7 328 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 NCSTNQ92542 709 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 TMEM245Q9H330 911 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 KAT8Q9H7Z6 458 aaKnown RBP11.16□□□□□ -0.62
NUP188-205ENST00000477069 NTN4Q9HB63 628 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 SPATA6Q9NWH7 488 aaPredicted RBP11.16□□□□□ -0.62
NUP188-205ENST00000477069 COQ6Q9Y2Z9 468 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 A0A096LPI6 279 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 A0A1B0GTW7 788 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 PABPN1LA6NDY0 278 aaKnown RBP11.16□□□□□ -0.62
NUP188-205ENST00000477069 K7ESM1 405 aa11.16□□□□□ -0.62
NUP188-205ENST00000477069 KPNA3O00505 521 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms