RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 OR9A1PQ8NGU1 263 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 MCFD2Q8NI22 146 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 SLC22A17Q8WUG5 538 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ROBO4Q8WZ75 1007 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 STAMQ92783 540 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 RFT1Q96AA3 541 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 HYLS1Q96M11 299 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 RNF145Q96MT1 663 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TEPSINQ96N21 525 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PWWP2AQ96N64 755 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ZNF558Q96NG5 402 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 KCNA7Q96RP8 456 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PIGSQ96S52 555 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 UHRF1Q96T88 793 aaPredicted RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 EYA3Q99504 573 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ZSWIM1Q9BR11 485 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 C2orf88Q9BSF0 95 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PI4K2AQ9BTU6 479 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TBCDQ9BTW9 1192 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 EDEM2Q9BV94 578 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 BBS2Q9BXC9 721 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TEX12Q9BXU0 123 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ANKRD19PQ9H560 264 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 FAM96AQ9H5X1 160 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 OPA3Q9H6K4 179 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TREM2Q9NZC2 230 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 KLK14Q9P0G3 267 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PPP4R1LQ9P1A2 415 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 MYEF2Q9P2K5 600 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 NUFIP1Q9UHK0 495 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 ADAM30Q9UKF2 790 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 SLC22A14Q9Y267 594 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PCDHB11Q9Y5F2 797 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PCDHGB2Q9Y5G2 931 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 KCNMB2Q9Y691 235 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 CDY1Q9Y6F8 540 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 A3GALT2U3KPV4 340 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TSPOAP1O95153 1857 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ZNF609O15014 1411 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 CD163L1Q9NR16 1453 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ATAD5Q96QE3 1844 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PNMA8CA0A1B0GUJ8 204 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 A0A1W2PPM1 405 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 A0A1W2PQH9 124 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 C9orf170A2RU37 121 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 KCNK1O00180 336 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ARVCFO00192 962 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 GRM8O00222 908 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 WWP2O00308 870 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ARNTLO00327 626 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 SULT1C2O00338 296 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PHYHO14832 338 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TOX3O15405 576 aaPredicted RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 MED6O75586 246 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 GJB3O75712 270 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TMEM63AO94886 807 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 MED26O95402 600 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PGK1P00558 417 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 F9P00740 461 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 MMP1P03956 469 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 RLN2P04090 185 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 CSF1RP07333 972 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ADRB2P07550 413 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 CELA3AP09093 270 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ACSM4P0C7M7 580 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 CCNYL3P0C7X3 344 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ARAFP10398 606 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PRPS2P11908 318 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 NR2C1P13056 603 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 CHRNB2P17787 502 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ME2P23368 584 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 HTR1BP28222 390 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ACADLP28330 430 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 MSX1P28360 303 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 GTF2E2P29084 291 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 ADSSP30520 456 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 BMP8BP34820 402 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 HSPA2P54652 639 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 BCAR1P56945 870 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 RAB25P57735 213 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PDIA2Q13087 525 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 SLAMF1Q13291 335 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ASAH1Q13510 395 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PTK6Q13882 451 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 SCARB2Q14108 478 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 AAK1Q2M2I8 961 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 HFEQ30201 348 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 FNDC3BQ53EP0 1204 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 C2CD6Q53TS8 623 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 COLEC12Q5KU26 742 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 SEL1L2Q5TEA6 688 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 MLIPQ5VWP3 458 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TMEM236Q5W0B7 351 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 DENND5AQ6IQ26 1287 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 INTS5Q6P9B9 1019 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 DEGS2Q6QHC5 323 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 SLC26A9Q7LBE3 791 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 FAM122BQ7Z309 247 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 BMP8AQ7Z5Y6 402 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PLEKHH3Q7Z736 793 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms