RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 NOMO3P69849 1222 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 EXT1Q16394 746 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 TAZQ16635 292 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 WIPI1Q5MNZ9 446 aaPredicted RBP7.61□□□□□ -1.19
USP54-211ENST00000474929 UBAP2Q5T6F2 1119 aaKnown RBP7.61□□□□□ -1.19
USP54-211ENST00000474929 ATL3Q6DD88 541 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 HIST2H2BDQ6DRA6 164 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 SPINK14Q6IE38 97 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 FAM83HQ6ZRV2 1179 aaPredicted RBP7.61□□□□□ -1.19
USP54-211ENST00000474929 TMTC1Q8IUR5 882 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 PSTKQ8IV42 348 aaKnown RBP7.61□□□□□ -1.19
USP54-211ENST00000474929 TMEM151BQ8IW70 566 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 TRIM59Q8IWR1 403 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 SMYD4Q8IYR2 804 aaPredicted RBP7.61□□□□□ -1.19
USP54-211ENST00000474929 RPRMLQ8N4K4 120 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 DNAJC22Q8N4W6 341 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 NPWQ8N729 165 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 GPR26Q8NDV2 337 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 DDHD1Q8NEL9 900 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 OR52E1Q8NGJ3 308 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 METTL21AQ8WXB1 218 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 FAF2Q96CS3 445 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 RBM41Q96IZ5 413 aaKnown RBP7.61□□□□□ -1.19
USP54-211ENST00000474929 SH3GL2Q99962 352 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 HES7Q9BYE0 225 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 MAGEB5Q9BZ81 275 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 ADAM19Q9H013 955 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 THAP2Q9H0W7 228 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 ZWILCHQ9H900 591 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 NT5MQ9NPB1 228 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 Q9UFV3 132 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 PCDHA7Q9UN72 937 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 FAM169AQ9Y6X4 670 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 DNAJC13O75165 2243 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 ABCA1O95477 2261 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 FITM1A5D6W6 292 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 ZNHIT1O43257 154 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 CCP110O43303 1012 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 MAFKO60675 156 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 NEURL1O76050 574 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 PEX11BO96011 259 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 GLI4P10075 376 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 MMP8P22894 467 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 ARL4AP40617 200 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 PRCPP42785 496 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 SYKP43405 635 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 HCAR3P49019 387 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 PTH2RP49190 550 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 ARSEP51690 589 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 ZNF143P52747 638 aaPredicted RBP7.6□□□□□ -1.19
USP54-211ENST00000474929 DSC2Q02487 901 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 ITGA9Q13797 1035 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 KIR2DS3Q14952 304 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 PDCD2Q16342 344 aaPredicted RBP7.6□□□□□ -1.19
USP54-211ENST00000474929 BTBD16Q32M84 506 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 CMPK2Q5EBM0 449 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 ZNF658Q5TYW1 1059 aaPredicted RBP7.6□□□□□ -1.19
USP54-211ENST00000474929 NAA35Q5VZE5 725 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 TMCO3Q6UWJ1 677 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 GBP6Q6ZN66 633 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 RGS9BPQ6ZS82 235 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 MEX3DQ86XN8 651 aaKnown RBP7.6□□□□□ -1.19
USP54-211ENST00000474929 ZNF677Q86XU0 584 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 PRSS58Q8IYP2 241 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 ADGRF3Q8IZF5 1079 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 TEX26Q8N6G2 289 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 C16orf52Q8NHV5 167 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 JOSD2Q8TAC2 188 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 HM13Q8TCT9 377 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 ISL2Q96A47 359 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 MVB12AQ96EY5 273 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 IMMP1LQ96LU5 166 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 RMDN2Q96LZ7 410 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 DACH2Q96NX9 599 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 FERD3LQ96RJ6 166 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 BEX2Q9BXY8 128 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 DHX35Q9H5Z1 703 aaKnown RBP7.6□□□□□ -1.19
USP54-211ENST00000474929 KCNK13Q9HB14 408 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 MAGEE1Q9HCI5 957 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 DTLQ9NZJ0 730 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 OR6C2Q9NZP2 312 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 CFAP45Q9UL16 551 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 HRH3Q9Y5N1 445 aa7.6□□□□□ -1.19
USP54-211ENST00000474929 ANK3Q12955 4377 aaKnown RBP7.59□□□□□ -1.19
USP54-211ENST00000474929 BICDL2A1A5D9 508 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 OR2AG2A6NM03 316 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 CASKO14936 926 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 HS6ST1O60243 411 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 STATHP02808 62 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 CELA2AP08217 269 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 C8orf89P0DMQ9 161 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 PAX1P15863 534 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 CFPP27918 469 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 SOX18P35713 384 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 OR1D4P47884 311 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 CD151P48509 253 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 CYB561P49447 251 aa7.59□□□□□ -1.19
USP54-211ENST00000474929 SNTB1Q13884 538 aaKnown RBP7.59□□□□□ -1.19
USP54-211ENST00000474929 FASTKQ14296 549 aaKnown RBP7.59□□□□□ -1.19
USP54-211ENST00000474929 ZIC1Q15915 447 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms