RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 DLGAP2Q9P1A6 1054 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 EGFL7Q9UHF1 273 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 CDH7Q9ULB5 785 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 GPR34Q9UPC5 381 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 AP4B1Q9Y6B7 739 aa9.54□□□□□ -0.88
USP39-214ENST00000474572 COL4A2P08572 1712 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 C7orf72A4D263 438 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 INPP4BO15327 924 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 VEGFDO43915 354 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 ERN1O75460 977 aaKnown RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 TIPRLO75663 272 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 C1orf105O95561 183 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 PGRP06401 933 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 FCGR1AP12314 374 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 GGT1P19440 569 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 IL10P22301 178 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 PSMA4P25789 261 aaKnown RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 MAP4P27816 1152 aaKnown RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 GJA4P35212 333 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 BDKRB1P46663 353 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 OR4D2P58180 307 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 TXNL4AP83876 142 aaKnown RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 MTAPQ13126 283 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 CHIT1Q13231 466 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 SHHQ15465 462 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 POM121L1PQ3SYA9 428 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 FAM174BQ3ZCQ3 159 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 CCSMST1Q4G0I0 132 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 RUNDC3AQ59EK9 446 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 TBCELQ5QJ74 424 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 PIP5KL1Q5T9C9 394 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 TANGO2Q6ICL3 276 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 SPRED1Q7Z699 444 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 DSG4Q86SJ6 1040 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 SPPL2CQ8IUH8 684 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 SFTPA1Q8IWL2 248 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 CHERPQ8IWX8 916 aaKnown RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 LILRA3Q8N6C8 439 aaPredicted RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 ZNF548Q8NEK5 533 aaPredicted RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 FAM110BQ8TC76 370 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 HM13Q8TCT9 377 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 NUDT8Q8WV74 236 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 SKA2Q8WVK7 121 aaPredicted RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 APIPQ96GX9 242 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 OR4K3Q96R72 315 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 PKP4Q99569 1192 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 CPPED1Q9BRF8 314 aaPredicted RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 WRAP53Q9BUR4 548 aaKnown RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 TRIM8Q9BZR9 551 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 PAIP1Q9H074 479 aaKnown RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 ATG10Q9H0Y0 220 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 ELOVL6Q9H5J4 265 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 RPF2Q9H7B2 306 aaKnown RBP9.53□□□□□ -0.88
USP39-214ENST00000474572 COQ10BQ9H8M1 238 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 BRF2Q9HAW0 419 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 ZFP14Q9HCL3 533 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 TRIM39Q9HCM9 518 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 PRSS16Q9NQE7 514 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 SERHLQ9NQF3 203 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 SLC25A37Q9NYZ2 338 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 VAPAQ9P0L0 249 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 ZNHIT2Q9UHR6 403 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 DLGAP4Q9Y2H0 992 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 COQ6Q9Y2Z9 468 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 FADS3Q9Y5Q0 445 aa9.53□□□□□ -0.88
USP39-214ENST00000474572 A0A096LPI6 279 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 KRT87PA6NCN2 255 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 FAM220BPB1ANY3 271 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 H3BM21 787 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 DFNA5O60443 496 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 UBTFL6P0CB48 400 aaPredicted RBP9.52□□□□□ -0.89
USP39-214ENST00000474572 C7P10643 843 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 MTHFD1P11586 935 aaKnown RBP9.52□□□□□ -0.89
USP39-214ENST00000474572 CDH1P12830 882 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 ITPKAP23677 461 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 FASP25445 335 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 ACADLP28330 430 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 TEAD1P28347 426 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 PTPN6P29350 595 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 PDHA2P29803 388 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 OXTRP30559 389 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 DRD3P35462 400 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 P2RY2P41231 377 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 HALP42357 657 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 GPR1P46091 355 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 PREPP48147 710 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 CCT8P50990 548 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 GZMMP51124 257 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 CHN2P52757 468 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 POLE2P56282 527 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 PHC1P78364 1004 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 IRF8Q02556 426 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 CYP4F3Q08477 520 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 ABRQ12979 859 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 DOC2AQ14183 400 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 ATP6AP1Q15904 470 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 MAPKAPK3Q16644 382 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 DPY19L1Q2PZI1 675 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 SLC44A4Q53GD3 710 aa9.52□□□□□ -0.89
USP39-214ENST00000474572 SGO1Q5FBB7 561 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms