RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 AKIRIN1Q9H9L7 192 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-210ENST00000473829 ZDHHC18Q9NUE0 388 aa18.25■□□□□ 0.51
PTCD3-210ENST00000473829 CXorf49A8MYA2 514 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-210ENST00000473829 GFYI3L273 518 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 SCRG1O75711 98 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 TSPAN12O95859 305 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 C1QAP02745 245 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 TUBB4AP04350 444 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 CAV1Q03135 178 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 UGT3A1Q6NUS8 523 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 STRA8Q7Z7C7 330 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 ZC3HC1Q86WB0 502 aaKnown RBP18.24■□□□□ 0.51
PTCD3-210ENST00000473829 CCDC25Q86WR0 208 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 TMEM126BQ8IUX1 230 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 FBXO15Q8NCQ5 510 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-210ENST00000473829 OR8K5Q8NH50 307 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 TCTN2Q96GX1 697 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 MCMBPQ9BTE3 642 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 PHACTR1Q9C0D0 580 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 FANCEQ9HB96 536 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 FAM114A2Q9NRY5 505 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 IL17BQ9UHF5 180 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 ADAMTS6Q9UKP5 1117 aa18.24■□□□□ 0.51
PTCD3-210ENST00000473829 CORO1CQ9ULV4 474 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-210ENST00000473829 SMG1Q96Q15 3661 aaKnown RBP18.23■□□□□ 0.51
PTCD3-210ENST00000473829 TCRBV9S1A1TA0A576 114 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 H3BMH7 237 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 EIF3FO00303 357 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-210ENST00000473829 TERTO14746 1132 aaKnown RBP18.23■□□□□ 0.51
PTCD3-210ENST00000473829 SLC16A8O95907 504 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 F8A1P23610 371 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 OAS2P29728 719 aaKnown RBP18.23■□□□□ 0.51
PTCD3-210ENST00000473829 YBX1P67809 324 aaKnown RBP18.23■□□□□ 0.51
PTCD3-210ENST00000473829 CYP4F2P78329 520 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 GUCY2DQ02846 1103 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 COL9A2Q14055 689 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-210ENST00000473829 FCRL6Q6DN72 434 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 FAM45BPQ6NSW5 357 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 SLC26A11Q86WA9 606 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 PALM2Q8IXS6 379 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 DNAJC22Q8N4W6 341 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 RAB42Q8N4Z0 105 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 PPFIBP2Q8ND30 876 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 OR2A1Q8NGT9 310 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 KIF18AQ8NI77 898 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 FAM45AQ8TCE6 357 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 SLC22A18Q96BI1 424 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 LINGO1Q96FE5 620 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 BBC3Q96PG8 261 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-210ENST00000473829 MIPEPQ99797 713 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 CHRNA10Q9GZZ6 450 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 GPN2Q9H9Y4 310 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-210ENST00000473829 SYTL2Q9HCH5 934 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 DMGDHQ9UI17 866 aaKnown RBP18.23■□□□□ 0.51
PTCD3-210ENST00000473829 CROTQ9UKG9 612 aa18.23■□□□□ 0.51
PTCD3-210ENST00000473829 FER1L5A0AVI2 2057 aa18.22■□□□□ 0.51
PTCD3-210ENST00000473829 NRP2O60462 931 aa18.22■□□□□ 0.51
PTCD3-210ENST00000473829 CPNE3O75131 537 aaKnown RBP18.22■□□□□ 0.51
PTCD3-210ENST00000473829 SKIV2L2P42285 1042 aaKnown RBP18.22■□□□□ 0.51
PTCD3-210ENST00000473829 GPS2Q13227 327 aa18.22■□□□□ 0.51
PTCD3-210ENST00000473829 PDAP1Q13442 181 aaKnown RBP18.22■□□□□ 0.51
PTCD3-210ENST00000473829 SF1Q15637 639 aaKnown RBP18.22■□□□□ 0.51
PTCD3-210ENST00000473829 PCSK4Q6UW60 755 aa18.22■□□□□ 0.51
PTCD3-210ENST00000473829 SUSD1Q6UWL2 747 aa18.22■□□□□ 0.51
PTCD3-210ENST00000473829 UBE2R2Q712K3 238 aaPredicted RBP18.22■□□□□ 0.51
PTCD3-210ENST00000473829 OR2L3Q8NG85 312 aa18.22■□□□□ 0.51
PTCD3-210ENST00000473829 ZNF480Q8WV37 535 aa18.22■□□□□ 0.51
PTCD3-210ENST00000473829 RUFY1Q96T51 708 aa18.22■□□□□ 0.51
PTCD3-210ENST00000473829 SLC12A9Q9BXP2 914 aa18.22■□□□□ 0.51
PTCD3-210ENST00000473829 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.22■□□□□ 0.51
PTCD3-210ENST00000473829 VWA7Q9Y334 891 aa18.22■□□□□ 0.51
PTCD3-210ENST00000473829 MRPS18BQ9Y676 258 aaKnown RBP18.22■□□□□ 0.51
PTCD3-210ENST00000473829 PCM1Q15154 2024 aa18.22■□□□□ 0.51
PTCD3-210ENST00000473829 FAM95CA0A1B0GW59 222 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 CTAGE15A4D2H0 777 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 FAM159BA6NKW6 160 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 MAP3K7O43318 606 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 SYF2O95926 243 aaKnown RBP18.21■□□□□ 0.51
PTCD3-210ENST00000473829 CTAGE8P0CG41 777 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 CYP2A7P20853 494 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 GRIA3P42263 894 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 MAGEA4P43358 317 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 RGS4P49798 205 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 PNLIPRP1P54315 467 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 ITGA1P56199 1179 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 ZNF460Q14592 562 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 FAM199XQ6PEV8 388 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-210ENST00000473829 FIGLAQ6QHK4 219 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 TMEM207Q6UWW9 146 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 C3orf62Q6ZUJ4 267 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 CTAGE6Q86UF2 777 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 CTAGE4Q8IX94 777 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 LRRC56Q8IYG6 542 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-210ENST00000473829 MNS1Q8NEH6 495 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 CT55Q8WUE5 264 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 TTC9Q92623 222 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 KIAA1143Q96AT1 154 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-210ENST00000473829 ACAT2Q9BWD1 397 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 SPRTNQ9H040 489 aaPredicted RBP18.21■□□□□ 0.51
PTCD3-210ENST00000473829 LRRC4CQ9HCJ2 640 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms