RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 NFS1Q9Y697 457 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 GOLGA8KD6RF30 607 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 GOLGA8TH3BQL2 631 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 C1orf105O95561 183 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 IGHEP01854 428 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 TPSB2P20231 275 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 ARNTP27540 789 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 CXCR5P32302 372 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 GRIA3P42263 894 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 BDKRB1P46663 353 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 UQCRFS1P47985 274 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 ARSFP54793 590 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 TPSAB1Q15661 275 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 ZC3H12BQ5HYM0 836 aaKnown RBP21.64■■□□□ 1.05
C9orf3-213ENST00000471978 CTSL3PQ5NE16 218 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 DCAF10Q5QP82 559 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 MRNIPQ6NTE8 343 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 TTLL10Q6ZVT0 673 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 RAB42Q8N4Z0 105 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 CLEC1AQ8NC01 280 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 DENND1AQ8TEH3 1009 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 SLAMF7Q9NQ25 335 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 LUZP4Q9P127 313 aa21.64■■□□□ 1.05
C9orf3-213ENST00000471978 RUVBL2Q9Y230 463 aaKnown RBP21.64■■□□□ 1.05
C9orf3-213ENST00000471978 A0A1B0GX78 115 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 TCRBV7S3A2A0A539 114 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 UMODP07911 640 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 GNLYP22749 145 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 FMO4P31512 558 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 GCGRP47871 477 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 TERF1P54274 439 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 TRIP13Q15645 432 aaPredicted RBP21.63■■□□□ 1.05
C9orf3-213ENST00000471978 CCSMST1Q4G0I0 132 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 RBMXL3Q8N7X1 1067 aaKnown RBP21.63■■□□□ 1.05
C9orf3-213ENST00000471978 FOPNLQ96NB1 174 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 BIRC8Q96P09 236 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 SLC22A11Q9NSA0 550 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 P4HTMQ9NXG6 502 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 SOX13Q9UN79 622 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 CCDC88CQ9P219 2028 aa21.63■■□□□ 1.05
C9orf3-213ENST00000471978 KRT87PA6NCN2 255 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 PFDN6O15212 129 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 PRICKLE3O43900 615 aaPredicted RBP21.62■■□□□ 1.05
C9orf3-213ENST00000471978 FKBP9O95302 570 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 CCNFP41002 786 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 INPP5JQ15735 1006 aaPredicted RBP21.62■■□□□ 1.05
C9orf3-213ENST00000471978 TCTE1Q5JU00 501 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 RNF187Q5TA31 235 aaPredicted RBP21.62■■□□□ 1.05
C9orf3-213ENST00000471978 VWA5B1Q5TIE3 1220 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 SLC6A19Q695T7 634 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 CNSTQ6PJW8 725 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 PPP1R32Q7Z5V6 425 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 TMEM151BQ8IW70 566 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 GALNT16Q8N428 558 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 PRELID2Q8N945 189 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 Q8NA96 180 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 LPGAT1Q92604 370 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 PNPLA2Q96AD5 504 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 ZUFSPQ96AP4 578 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 SELENOSQ9BQE4 189 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 CUTCQ9NTM9 273 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 C5AR2Q9P296 337 aa21.62■■□□□ 1.05
C9orf3-213ENST00000471978 TARM1B6A8C7 271 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 ITGAXP20702 1163 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 MCM3P25205 808 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 PSMB5P28074 263 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 VPS41P49754 854 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 SARNPP82979 210 aaKnown RBP21.61■■□□□ 1.05
C9orf3-213ENST00000471978 GRM7Q14831 915 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 CYP2A13Q16696 494 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 TYSND1Q2T9J0 566 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 PRR30Q53SZ7 412 aaPredicted RBP21.61■■□□□ 1.05
C9orf3-213ENST00000471978 LRRC8AQ8IWT6 810 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 TTC29Q8NA56 475 aaPredicted RBP21.61■■□□□ 1.05
C9orf3-213ENST00000471978 HMGCLL1Q8TB92 370 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 MAGEC3Q8TD91 643 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 FKBP10Q96AY3 582 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 FAM136AQ96C01 138 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 TCF12Q99081 682 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 MIPEPQ99797 713 aa21.61■■□□□ 1.05
C9orf3-213ENST00000471978 TSR3Q9UJK0 312 aaKnown RBP21.61■■□□□ 1.05
C9orf3-213ENST00000471978 H3BMM5 538 aa21.6■■□□□ 1.05
C9orf3-213ENST00000471978 DSCR3O14972 297 aa21.6■■□□□ 1.05
C9orf3-213ENST00000471978 NIPSNAP2O75323 286 aa21.6■■□□□ 1.05
C9orf3-213ENST00000471978 AVILO75366 819 aa21.6■■□□□ 1.05
C9orf3-213ENST00000471978 PIM1P11309 404 aaPredicted RBP21.6■■□□□ 1.05
C9orf3-213ENST00000471978 GPS1Q13098 491 aa21.6■■□□□ 1.05
C9orf3-213ENST00000471978 KCNJ11Q14654 390 aa21.6■■□□□ 1.05
C9orf3-213ENST00000471978 MYBPC3Q14896 1274 aa21.6■■□□□ 1.05
C9orf3-213ENST00000471978 YOD1Q5VVQ6 348 aaPredicted RBP21.6■■□□□ 1.05
C9orf3-213ENST00000471978 KIAA0930Q6ICG6 404 aaPredicted RBP21.6■■□□□ 1.05
C9orf3-213ENST00000471978 OVCH1Q7RTY7 1134 aa21.6■■□□□ 1.05
C9orf3-213ENST00000471978 ZNF285Q96NJ3 590 aa21.6■■□□□ 1.05
C9orf3-213ENST00000471978 MAP10Q9P2G4 905 aa21.6■■□□□ 1.05
C9orf3-213ENST00000471978 CRYL1Q9Y2S2 319 aa21.6■■□□□ 1.05
C9orf3-213ENST00000471978 SPTAN1Q13813 2472 aaKnown RBP21.6■■□□□ 1.05
C9orf3-213ENST00000471978 MASP2O00187 686 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 KLHL41O60662 606 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 CTSVO60911 334 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 MATN4O95460 622 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms