RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 TMEM9Q9P0T7 183 aa16.94■□□□□ 0.3
RRP1-202ENST00000471909 TRPS1Q9UHF7 1281 aa16.94■□□□□ 0.3
RRP1-202ENST00000471909 POLR3HQ9Y535 204 aaPredicted RBP16.94■□□□□ 0.3
RRP1-202ENST00000471909 FADS2P1A8MWK0 482 aa16.94■□□□□ 0.3
RRP1-202ENST00000471909 ACOX3O15254 700 aa16.94■□□□□ 0.3
RRP1-202ENST00000471909 RSL1D1O76021 490 aaKnown RBP16.94■□□□□ 0.3
RRP1-202ENST00000471909 ADH5P11766 374 aa16.94■□□□□ 0.3
RRP1-202ENST00000471909 GGT5P36269 586 aa16.94■□□□□ 0.3
RRP1-202ENST00000471909 VIPR2P41587 438 aa16.94■□□□□ 0.3
RRP1-202ENST00000471909 CASP2P42575 452 aa16.94■□□□□ 0.3
RRP1-202ENST00000471909 ZNF648Q5T619 568 aaPredicted RBP16.94■□□□□ 0.3
RRP1-202ENST00000471909 HENMT1Q5T8I9 393 aaKnown RBP16.94■□□□□ 0.3
RRP1-202ENST00000471909 KIAA2013Q8IYS2 634 aa16.94■□□□□ 0.3
RRP1-202ENST00000471909 CENPSQ8N2Z9 138 aa16.94■□□□□ 0.3
RRP1-202ENST00000471909 C12orf76Q8N812 135 aaPredicted RBP16.94■□□□□ 0.3
RRP1-202ENST00000471909 ULK1O75385 1050 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 C8GP07360 202 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 SLC2A4P14672 509 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 HMGCS1Q01581 520 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 CYP51A1Q16850 503 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 ANKRD26P1Q6NSI1 321 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 SLC2A7Q6PXP3 512 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 BEND7Q8N7W2 519 aaPredicted RBP16.93■□□□□ 0.3
RRP1-202ENST00000471909 PPP3R2Q96LZ3 170 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 SLC32A1Q9H598 525 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 PALMDQ9NP74 551 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 INTS7Q9NVH2 962 aaKnown RBP16.93■□□□□ 0.3
RRP1-202ENST00000471909 ZNF490Q9ULM2 529 aaPredicted RBP16.93■□□□□ 0.3
RRP1-202ENST00000471909 TRIM64BA6NI03 449 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 C16orf96A6NNT2 1141 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 INPP4BO15327 924 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 ENO2P09104 434 aaPredicted RBP16.93■□□□□ 0.3
RRP1-202ENST00000471909 MAP4P27816 1152 aaKnown RBP16.93■□□□□ 0.3
RRP1-202ENST00000471909 RPS9P46781 194 aaKnown RBP16.93■□□□□ 0.3
RRP1-202ENST00000471909 BCAP31P51572 246 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 LBX1P52954 281 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 RPL38P63173 70 aaKnown RBP16.93■□□□□ 0.3
RRP1-202ENST00000471909 CYBRD1Q53TN4 286 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 SGO1Q5FBB7 561 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 PLEKHS1Q5SXH7 462 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 NANOGP8Q6NSW7 305 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 RNF165Q6ZSG1 346 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 TRIM46Q7Z4K8 759 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 C7orf61Q8IZ16 206 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 OSCP1Q8WVF1 389 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 TUBA1CQ9BQE3 449 aa16.93■□□□□ 0.3
RRP1-202ENST00000471909 KRT87PA6NCN2 255 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 MANBAO00462 879 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 RGS14O43566 566 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 SERPINB7O75635 380 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 SRPRAP08240 638 aaKnown RBP16.92■□□□□ 0.3
RRP1-202ENST00000471909 MPC1LP0DKB6 136 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 VASPP50552 380 aaPredicted RBP16.92■□□□□ 0.3
RRP1-202ENST00000471909 BMXP51813 675 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 ATP1A4Q13733 1029 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 DPPA4Q7L190 304 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 ADGRD2Q7Z7M1 963 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 TRAM1L1Q8N609 369 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 PNPT1Q8TCS8 783 aaKnown RBP16.92■□□□□ 0.3
RRP1-202ENST00000471909 MAGEE2Q8TD90 523 aaPredicted RBP16.92■□□□□ 0.3
RRP1-202ENST00000471909 SMG7Q92540 1137 aaKnown RBP16.92■□□□□ 0.3
RRP1-202ENST00000471909 TMEM74Q96NL1 305 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 P2RY13Q9BPV8 354 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 YTHDF1Q9BYJ9 559 aaKnown RBP16.92■□□□□ 0.3
RRP1-202ENST00000471909 DKK3Q9UBP4 350 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 WDR37Q9Y2I8 494 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 OR2AG2A6NM03 316 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 CFAP99D6REC4 459 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 GFYI3L273 518 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 HOXC11O43248 304 aaPredicted RBP16.92■□□□□ 0.3
RRP1-202ENST00000471909 TULP3O75386 442 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 WDR47O94967 919 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 CLDN9O95484 217 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 RB1P06400 928 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 CCNA2P20248 432 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 XPAP23025 273 aaPredicted RBP16.92■□□□□ 0.3
RRP1-202ENST00000471909 YAP1P46937 504 aaKnown RBP16.92■□□□□ 0.3
RRP1-202ENST00000471909 GSK3BP49841 420 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 HLCSP50747 726 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 GRSF1Q12849 480 aaKnown RBP eCLIP16.92■□□□□ 0.3
RRP1-202ENST00000471909 NFATC3Q12968 1075 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 PLA2G4EQ3MJ16 856 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 CCNYL2Q5T2Q4 361 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 NCCRP1Q6ZVX7 275 aaPredicted RBP16.92■□□□□ 0.3
RRP1-202ENST00000471909 CHST15Q7LFX5 561 aaPredicted RBP16.92■□□□□ 0.3
RRP1-202ENST00000471909 TECPR1Q7Z6L1 1165 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 RGL4Q8IZJ4 473 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 ELMO1Q92556 727 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 TANKQ92844 425 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 USP7Q93009 1102 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 LRIG1Q96JA1 1093 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 ALG2Q9H553 416 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 NANOGQ9H9S0 305 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 INIPQ9NRY2 104 aa16.92■□□□□ 0.3
RRP1-202ENST00000471909 DYTNA2CJ06 578 aa16.91■□□□□ 0.3
RRP1-202ENST00000471909 GRXCR1A8MXD5 290 aa16.91■□□□□ 0.3
RRP1-202ENST00000471909 SLC28A1O00337 649 aa16.91■□□□□ 0.3
RRP1-202ENST00000471909 FUCA1P04066 466 aa16.91■□□□□ 0.3
RRP1-202ENST00000471909 HIST1H2AGP0C0S8 130 aaPredicted RBP16.91■□□□□ 0.3
RRP1-202ENST00000471909 ZNF182P17025 639 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms