RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 GRHL1Q9NZI5 618 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SLC17A7Q9P2U7 560 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 COMMD3Q9UBI1 195 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FAM198AQ9UFP1 575 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FBXL3Q9UKT7 428 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FARSAQ9Y285 508 aaKnown RBP12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 COMMD3-BMI1R4GMX3 469 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 INSIG1O15503 277 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CRTC2Q53ET0 693 aaPredicted RBP12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 VSTM1Q6UX27 236 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TMEM192Q8IY95 271 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OR8H3Q8N146 312 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 DPF1Q92782 380 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FBXW5Q969U6 566 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PCED1BQ96HM7 432 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MFSD11O43934 449 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 NOBOXO60393 691 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 NDST3O95803 873 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 INHAP05111 366 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 AP3S2P59780 193 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PLPPR4Q7Z2D5 763 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 JAGN1Q8N5M9 183 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 IKZF4Q9H2S9 585 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 METTL21EPA6NDL7 271 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 KAT7O95251 611 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 GOT2P00505 430 aaKnown RBP12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 C2P06681 752 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MLC1Q15049 377 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PDGFRLQ15198 375 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 AZIN2Q96A70 460 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SLC35G5Q96KT7 338 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SLC39A3Q9BRY0 314 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ZNF700Q9H0M5 742 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MUSKO15146 869 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CDC123O75794 336 aaPredicted RBP12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SERPINA6P08185 405 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ATP5A1P25705 553 aaKnown RBP12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 LAS2Q8IYD9 372 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PYROXD2Q8N2H3 581 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CDK15Q96Q40 435 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 UCK2Q9BZX2 261 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 AP4B1Q9Y6B7 739 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 NUP205Q92621 2012 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 H0YJX3 145 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TPPPO94811 219 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CYP3A5P20815 502 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 RNF144AP50876 292 aaPredicted RBP12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OR7G1Q8NGA0 311 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SH3YL1Q96HL8 342 aaPredicted RBP12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FEM1AQ9BSK4 669 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 LGR4Q9BXB1 951 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TTTY10Q9BZA0 68 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 hCG_1818297A0A087WSY0 165 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 DHX15O43143 795 aaKnown RBP12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ANGPTL1O95841 491 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PSKH1P11801 424 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 DSG2Q14126 1118 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CDKAL1Q5VV42 579 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FAM71AQ8IYT1 594 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 RHOJQ9H4E5 214 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 HPSEQ9Y251 543 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 KIF20BQ96Q89 1820 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 BLOC1S5-TXNDC5H3BN57 136 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 UGT2B11O75310 529 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CCNKO75909 580 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ACSL1P33121 698 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 POLR2HP52434 150 aaKnown RBP12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 GRM2Q14416 872 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ATPAF1Q5TC12 328 aaPredicted RBP12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 AGAP11Q8TF27 550 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CPXM1Q96SM3 734 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 RNPEPL1Q9HAU8 725 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 A0A0U1RQJ8 604 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SHOXO15266 292 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CH25HO95992 272 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 RPS2P15880 293 aaKnown RBP12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 S100A10P60903 97 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ACTR10Q9NZ32 417 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MEMO1Q9Y316 297 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FADS3Q9Y5Q0 445 aa12.98□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PGRP06401 933 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 HCAR3P49019 387 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FMO1Q01740 532 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FAM174BQ3ZCQ3 159 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ABHD13Q7L211 337 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SPATA19Q7Z5L4 167 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CNDP2Q96KP4 475 aaKnown RBP12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 UPB1Q9UBR1 384 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SLC35F4A4IF30 521 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OR2AT4A6NND4 320 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PPEF2O14830 753 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CDH4P55283 916 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OR4E2Q8NGC2 313 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ADAD1Q96M93 576 aaKnown RBP12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MAGEL2Q9UJ55 1249 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PTCH2Q9Y6C5 1203 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ARID1AO14497 2285 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 DAPL1A0PJW8 107 aa12.97□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PRAMEF12O95522 483 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms