RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 DLG3Q92796 817 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 ZUFSPQ96AP4 578 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 RAD51AP1Q96B01 352 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 MIPEPQ99797 713 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 TREX1Q9NSU2 369 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 CUTCQ9NTM9 273 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 INTS7Q9NVH2 962 aaKnown RBP12.74□□□□□ -0.37
CPSF4-210ENST00000469897 ASF1BQ9NVP2 202 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 PLEKHB1Q9UF11 243 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-210ENST00000469897 CDC23Q9UJX2 597 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 RUVBL2Q9Y230 463 aaKnown RBP12.74□□□□□ -0.37
CPSF4-210ENST00000469897 B3GNT3Q9Y2A9 372 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 A0A1B0GX78 115 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 GOLGA8KD6RF30 607 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 GOLGA8TH3BQL2 631 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 AGPSO00116 658 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 DSCR3O14972 297 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 ALOX12BO75342 701 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 VAPBO95292 243 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 CBX6O95503 412 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 ALPPP05187 535 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 PIM1P11309 404 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-210ENST00000469897 MGAT1P26572 445 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 FMO4P31512 558 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 OR1D4P47884 311 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 GLRBP48167 497 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 TERF1P54274 439 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 SOX8P57073 446 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 BASP1P80723 227 aaKnown RBP12.73□□□□□ -0.37
CPSF4-210ENST00000469897 TMED2Q15363 201 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 NKG7Q16617 165 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 WASHC2DQ5SRD0 308 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 IGFL3Q6UXB1 125 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 OTOAQ7RTW8 1153 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 IQCKQ8N0W5 287 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 ZADH2Q8N4Q0 377 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 DTWD1Q8N5C7 304 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 METTL27Q8N6F8 245 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-210ENST00000469897 DENND1AQ8TEH3 1009 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 UBE2Q2Q8WVN8 375 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 PANX3Q96QZ0 392 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 SELENOSQ9BQE4 189 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 TSGA10Q9BZW7 698 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 IL22Q9GZX6 179 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 ILKAPQ9H0C8 392 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-210ENST00000469897 BFARQ9NZS9 450 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 STOX2Q9P2F5 926 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-210ENST00000469897 ZC3H7BQ9UGR2 993 aaKnown RBP12.73□□□□□ -0.37
CPSF4-210ENST00000469897 GNPTGQ9UJJ9 305 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 TSR3Q9UJK0 312 aaKnown RBP12.73□□□□□ -0.37
CPSF4-210ENST00000469897 MAU2Q9Y6X3 613 aa12.73□□□□□ -0.37
CPSF4-210ENST00000469897 MAST4O15021 2626 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 TARM1B6A8C7 271 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 KPNA5O15131 536 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 KLHL41O60662 606 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 SRPX2O60687 465 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-210ENST00000469897 CTSVO60911 334 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 IPO13O94829 963 aaKnown RBP12.72□□□□□ -0.37
CPSF4-210ENST00000469897 ONECUT2O95948 504 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 ALBP02768 609 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 EIF2S1P05198 315 aaKnown RBP12.72□□□□□ -0.37
CPSF4-210ENST00000469897 MMP11P24347 488 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 ITGA3P26006 1051 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 PSMB5P28074 263 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 BDKRB1P46663 353 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 EIF3BP55884 814 aaKnown RBP12.72□□□□□ -0.37
CPSF4-210ENST00000469897 VSX2P58304 361 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-210ENST00000469897 YBX1P67809 324 aaKnown RBP12.72□□□□□ -0.37
CPSF4-210ENST00000469897 FASTKQ14296 549 aaKnown RBP12.72□□□□□ -0.37
CPSF4-210ENST00000469897 GRM7Q14831 915 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 NR6A1Q15406 480 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 FAM214AQ32MH5 1076 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 TCTE1Q5JU00 501 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 CTSL3PQ5NE16 218 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 FRMPD2BQ6IN97 320 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 CNSTQ6PJW8 725 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 COX15Q7KZN9 410 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 SDCCAG8Q86SQ7 713 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-210ENST00000469897 PARP9Q8IXQ6 854 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 OTUD6BQ8N6M0 293 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 OR2A1Q8NGT9 310 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 INPP5DQ92835 1189 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 NACC2Q96BF6 587 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 FAM136AQ96C01 138 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 MFSD3Q96ES6 412 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 BIRC8Q96P09 236 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 SLC29A3Q9BZD2 475 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 SOX17Q9H6I2 414 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-210ENST00000469897 LZTFL1Q9NQ48 299 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 EIF2B3Q9NR50 452 aaKnown RBP12.72□□□□□ -0.37
CPSF4-210ENST00000469897 GALPQ9UBC7 116 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 FBXL4Q9UKA2 621 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 COPG1Q9Y678 874 aaKnown RBP12.72□□□□□ -0.37
CPSF4-210ENST00000469897 PCSK5Q92824 1860 aa12.72□□□□□ -0.37
CPSF4-210ENST00000469897 LOC105369274A0A096LPK9 316 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 LOC102723532A0A0G2JNH3 316 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 A0A0J9YVX5 310 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 TCRBV7S3A2A0A539 114 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 A1L4Q6 167 aa12.71□□□□□ -0.37
CPSF4-210ENST00000469897 HYKKA2RU49 373 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms