RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 WDR83Q9BRX9 315 aaKnown RBP14.03□□□□□ -0.16
COL27A1-203ENST00000468565 PDE7BQ9NP56 450 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 MARCH4Q9P2E8 410 aaPredicted RBP14.03□□□□□ -0.16
COL27A1-203ENST00000468565 POMT2Q9UKY4 750 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 IKBKGQ9Y6K9 419 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 EIF4E1BA6NMX2 242 aaKnown RBP14.02□□□□□ -0.16
COL27A1-203ENST00000468565 PRMT5O14744 637 aaPredicted RBP14.02□□□□□ -0.16
COL27A1-203ENST00000468565 ZBTB11O95625 1053 aaPredicted RBP14.02□□□□□ -0.16
COL27A1-203ENST00000468565 TAC1P20366 129 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 RPS3P23396 243 aaKnown RBP eCLIP14.02□□□□□ -0.16
COL27A1-203ENST00000468565 ARNTP27540 789 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 SCTRP47872 440 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 ABHD18Q0P651 414 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 EFTUD2Q15029 972 aaKnown RBP eCLIP14.02□□□□□ -0.16
COL27A1-203ENST00000468565 ZKSCAN8Q15776 578 aaPredicted RBP14.02□□□□□ -0.16
COL27A1-203ENST00000468565 HHATQ5VTY9 493 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 KIAA0930Q6ICG6 404 aaPredicted RBP14.02□□□□□ -0.16
COL27A1-203ENST00000468565 TIPARPQ7Z3E1 657 aaKnown RBP14.02□□□□□ -0.16
COL27A1-203ENST00000468565 LDB1Q86U70 411 aaPredicted RBP14.02□□□□□ -0.16
COL27A1-203ENST00000468565 LRRC6Q86X45 466 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 PPP1R3BQ86XI6 285 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 TBC1D21Q8IYX1 336 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 C4orf33Q8N1A6 199 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 PHC3Q8NDX5 983 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 MFSD3Q96ES6 412 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 FCRL4Q96PJ5 515 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 EFHD1Q9BUP0 239 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 ULBP3Q9BZM4 244 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 XAB2Q9HCS7 855 aaKnown RBP14.02□□□□□ -0.16
COL27A1-203ENST00000468565 POLG2Q9UHN1 485 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 ASF1AQ9Y294 204 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 BTRCQ9Y297 605 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 BOLA1Q9Y3E2 137 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 TEX264Q9Y6I9 313 aa14.02□□□□□ -0.16
COL27A1-203ENST00000468565 IQANK1A0A1B0GTG1 560 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 LIFP15018 202 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 POLR2CP19387 275 aaPredicted RBP14.02□□□□□ -0.17
COL27A1-203ENST00000468565 WT1P19544 449 aaPredicted RBP14.02□□□□□ -0.17
COL27A1-203ENST00000468565 CCR7P32248 378 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 ARL4DP49703 201 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 TUBB3Q13509 450 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 TAF1BQ53T94 588 aaPredicted RBP14.02□□□□□ -0.17
COL27A1-203ENST00000468565 RGS9BPQ6ZS82 235 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 CAND1Q86VP6 1230 aaKnown RBP14.02□□□□□ -0.17
COL27A1-203ENST00000468565 AMIGO1Q86WK6 493 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 RASGRP3Q8IV61 690 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 SLC22A15Q8IZD6 547 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 OR5K2Q8NHB8 316 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 DCAKDQ8WVC6 231 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 KIAA1143Q96AT1 154 aaPredicted RBP14.02□□□□□ -0.17
COL27A1-203ENST00000468565 PANX3Q96QZ0 392 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 HGH1Q9BTY7 390 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 P2RY12Q9H244 342 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 OCEL1Q9H607 264 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 C1GALT1Q9NS00 363 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 GNPTGQ9UJJ9 305 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 RARRES3Q9UL19 164 aa14.02□□□□□ -0.17
COL27A1-203ENST00000468565 COL6A6A6NMZ7 2263 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 SPTBP11277 2137 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 A0A1W2PPM1 405 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 BTN3A3O00478 584 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 BTN3A1O00481 513 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 TYROBPO43914 113 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 GPC4O75487 556 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 NDUFS3O75489 264 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 DNAJC8O75937 253 aaPredicted RBP14.01□□□□□ -0.17
COL27A1-203ENST00000468565 VAPBO95292 243 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 ITGB2P05107 769 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 APOA4P06727 396 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 GSTA2P09210 222 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 FOLR1P15328 257 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 ZNF28P17035 718 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 KRT4P19013 534 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 PAMP19021 973 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 RPA3P35244 121 aaPredicted RBP14.01□□□□□ -0.17
COL27A1-203ENST00000468565 ARCN1P48444 511 aaKnown RBP14.01□□□□□ -0.17
COL27A1-203ENST00000468565 SF3A3Q12874 501 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL27A1-203ENST00000468565 PDK4Q16654 411 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 TYSND1Q2T9J0 566 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 MRNIPQ6NTE8 343 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 GBP7Q8N8V2 638 aaPredicted RBP14.01□□□□□ -0.17
COL27A1-203ENST00000468565 OR5AR1Q8NGP9 310 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 LKAAEAR1Q8TD35 194 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 ASZ1Q8WWH4 475 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 LRRC39Q96DD0 335 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 PITPNM3Q9BZ71 974 aa14.01□□□□□ -0.17
COL27A1-203ENST00000468565 MAGEB16A2A368 324 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 GSAPA4D1B5 854 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 C2orf74A8MZ97 194 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 KDM1AO60341 852 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 AVILO75366 819 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 MT-ND3P03897 115 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 INHBAP08476 426 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 EBLN1P0CF75 366 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 ITGB6P18564 788 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 CDH3P22223 829 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 SHMT2P34897 504 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 STAT5AP42229 794 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 PRKG2Q13237 762 aa14□□□□□ -0.17
COL27A1-203ENST00000468565 TMTC4Q5T4D3 741 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms