RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 MTHFRP42898 656 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 RPL21P46778 160 aaKnown RBP3.83□□□□□ -1.8
RBM39-226ENST00000468086 LEPRP48357 1165 aaKnown RBP3.83□□□□□ -1.8
RBM39-226ENST00000468086 LMAN1P49257 510 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 PAX9P55771 341 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 CYCSP99999 105 aaKnown RBP3.83□□□□□ -1.8
RBM39-226ENST00000468086 LMOD3Q0VAK6 560 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 HSPB3Q12988 150 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 DRP2Q13474 957 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 SNAPC1Q16533 368 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 UGP2Q16851 508 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 SLC35D3Q5M8T2 416 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 LCN1P1Q5VSP4 162 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 SLC25A47Q6Q0C1 308 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 RTN4RL2Q86UN3 420 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 DNAAF5Q86Y56 855 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 SYT2Q8N9I0 419 aaPredicted RBP3.83□□□□□ -1.8
RBM39-226ENST00000468086 OR11H4Q8NGC9 324 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 GTF3AQ92664 365 aaKnown RBP3.83□□□□□ -1.8
RBM39-226ENST00000468086 C10orf90Q96M02 699 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 PKP2Q99959 881 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 STUB1Q9UNE7 303 aa3.83□□□□□ -1.8
RBM39-226ENST00000468086 NEMP2A6NFY4 417 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 O00370 1275 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 MEIS2O14770 477 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 SH3BP5O60239 455 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 GJB3O75712 270 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 CDH13P55290 713 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 DSCR10P59022 87 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 UBXN2AP68543 259 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 TAF10Q12962 218 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 CA9Q16790 459 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 SNAI3Q3KNW1 292 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 IL27RAQ6UWB1 636 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 BRINP3Q76B58 766 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 PTAR1Q7Z6K3 402 aaPredicted RBP3.82□□□□□ -1.8
RBM39-226ENST00000468086 LINC00346Q8IVM7 164 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 SPDL1Q96EA4 605 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 DCTN5Q9BTE1 182 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 Q9N2K0 584 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 PDE7BQ9NP56 450 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 FAM207AQ9NSI2 230 aaPredicted RBP3.82□□□□□ -1.8
RBM39-226ENST00000468086 PPIEQ9UNP9 301 aaKnown RBP3.82□□□□□ -1.8
RBM39-226ENST00000468086 PPP1R3CQ9UQK1 317 aa3.82□□□□□ -1.8
RBM39-226ENST00000468086 PASKQ96RG2 1323 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 KLC1Q07866 573 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 ELAVL2Q12926 359 aaKnown RBP3.81□□□□□ -1.8
RBM39-226ENST00000468086 SQLEQ14534 574 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 HERC3Q15034 1050 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 UGT3A2Q3SY77 523 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 TAF1BQ53T94 588 aaPredicted RBP3.81□□□□□ -1.8
RBM39-226ENST00000468086 C2CD6Q53TS8 623 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 XKR3Q5GH77 459 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 SLC25A53Q5H9E4 307 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 PRR27Q6MZM9 219 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 TMPRSS11BQ86T26 416 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 ZNF595Q8IYB9 648 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 TDRD5Q8NAT2 981 aaKnown RBP3.81□□□□□ -1.8
RBM39-226ENST00000468086 PRSS33Q8NF86 280 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 GPRC5AQ8NFJ5 357 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 CFAP61Q8NHU2 1237 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 MAPK15Q8TD08 544 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 PTERQ96BW5 349 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 ARSGQ96EG1 525 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 NKX3-1Q99801 234 aaPredicted RBP3.81□□□□□ -1.8
RBM39-226ENST00000468086 SHARPINQ9H0F6 387 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 UPF3AQ9H1J1 476 aaKnown RBP3.81□□□□□ -1.8
RBM39-226ENST00000468086 PIH1D3Q9NQM4 214 aaKnown RBP3.81□□□□□ -1.8
RBM39-226ENST00000468086 SLC7A10Q9NS82 523 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 MAN2C1Q9NTJ4 1040 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 FBXO2Q9UK22 296 aaPredicted RBP3.81□□□□□ -1.8
RBM39-226ENST00000468086 ABT1Q9ULW3 272 aaKnown RBP3.81□□□□□ -1.8
RBM39-226ENST00000468086 PADI2Q9Y2J8 665 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 SNX8Q9Y5X2 465 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 CACNA1FO60840 1977 aa3.81□□□□□ -1.8
RBM39-226ENST00000468086 A0A1W2PPQ1 181 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 MEX3AA1L020 520 aaKnown RBP3.8□□□□□ -1.8
RBM39-226ENST00000468086 KRT33AO76009 404 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 BEST1O76090 585 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 SEC24AO95486 1093 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 DUS4LO95620 317 aaKnown RBP3.8□□□□□ -1.8
RBM39-226ENST00000468086 CLDN1O95832 211 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 SMIM18P0DKX4 95 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 SLC2A2P11168 524 aaPredicted RBP3.8□□□□□ -1.8
RBM39-226ENST00000468086 GP1BBP13224 206 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 GATA1P15976 413 aaPredicted RBP3.8□□□□□ -1.8
RBM39-226ENST00000468086 CYP2A7P20853 494 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 HLA-FP30511 346 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 TLX1P31314 330 aaPredicted RBP3.8□□□□□ -1.8
RBM39-226ENST00000468086 NOVP48745 357 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 KRTAP10-3P60369 221 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 PSMC6P62333 389 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 ZNF415Q09FC8 603 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 PRKG2Q13237 762 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 NECTIN1Q15223 517 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 MTHFSDQ2M296 383 aaKnown RBP3.8□□□□□ -1.8
RBM39-226ENST00000468086 GLIPR1L2Q4G1C9 344 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 MFSD12Q6NUT3 480 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 TMEM207Q6UWW9 146 aa3.8□□□□□ -1.8
RBM39-226ENST00000468086 Q6ZRP5 223 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms