RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CYP4A22Q5TCH4 519 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 ARHGAP22Q7Z5H3 698 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 TMEM139Q8IV31 216 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 APLFQ8IW19 511 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-211ENST00000466054 THAP8Q8NA92 274 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 KIF18AQ8NI77 898 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 FAM76AQ8TAV0 307 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 TMEM143Q96AN5 459 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 SPSB1Q96BD6 273 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 SENP5Q96HI0 755 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-211ENST00000466054 RMDN2Q96LZ7 410 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 EDEM3Q9BZQ6 932 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 ANKRD2Q9GZV1 360 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 CDH20Q9HBT6 801 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 SIX2Q9NPC8 291 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 CACNG4Q9UBN1 327 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 DAPK2Q9UIK4 370 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 KCNJ14Q9UNX9 436 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 LIPGQ9Y5X9 500 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 NOTCH2Q04721 2471 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 EML2O95834 649 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 CSN3P07498 182 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 PRSS56P0CW18 603 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 IRF2P14316 349 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 EPCAMP16422 314 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 CD22P20273 847 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 HSPA4P34932 840 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 CCR10P46092 362 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 GLIPR1P48060 266 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 B3GALT5-AS1P59052 145 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 KLC1Q07866 573 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 CAMK2DQ13557 499 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 UGT3A2Q3SY77 523 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 MCMDC2Q4G0Z9 681 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 PHLDA2Q53GA4 152 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 SPECC1Q5M775 1068 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 C20orf194Q5TEA3 1177 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 ADCK2Q7Z695 626 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 TLK2Q86UE8 772 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 RYBPQ8N488 228 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-211ENST00000466054 MARVELD2Q8N4S9 558 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 ZNF383Q8NA42 475 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 SLC4A11Q8NBS3 891 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 OR11H4Q8NGC9 324 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 OR52N5Q8NH56 324 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 OLIG1Q8TAK6 271 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 EXT2Q93063 718 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 ZNF501Q96CX3 271 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-211ENST00000466054 LGALS12Q96DT0 336 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 GIMAP5Q96F15 307 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 THOC1Q96FV9 657 aaKnown RBP3.86□□□□□ -1.79
LRCH3-211ENST00000466054 MTMR12Q9C0I1 747 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 CPVLQ9H3G5 476 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 ST6GALNAC4Q9H4F1 302 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 SLC52A3Q9NQ40 469 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 TBC1D7Q9P0N9 293 aa3.86□□□□□ -1.79
LRCH3-211ENST00000466054 C2orf81A6NN90 581 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 SLCO1B7G3V0H7 640 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 O00370 1275 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 DIAPH2O60879 1101 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 DFFBO76075 338 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 PAK4O96013 591 aaPredicted RBP3.85□□□□□ -1.79
LRCH3-211ENST00000466054 IGHV4-31P0DP07 118 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 FDPSP14324 419 aaKnown RBP3.85□□□□□ -1.79
LRCH3-211ENST00000466054 CYP11B2P19099 503 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 PSMA3P25788 255 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 ZNF415Q09FC8 603 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 TFCP2Q12800 502 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 P2RY6Q15077 328 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 SLC1A5Q15758 541 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 NPTX1Q15818 432 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 PHKG1Q16816 387 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 BSPRYQ5W0U4 402 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 NDUFAF2Q8N183 169 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 BMPERQ8N8U9 685 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 IQUBQ8NA54 791 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 TMEM190Q8WZ59 177 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 ANKRD9Q96BM1 317 aaPredicted RBP3.85□□□□□ -1.79
LRCH3-211ENST00000466054 OTUB1Q96FW1 271 aaPredicted RBP3.85□□□□□ -1.79
LRCH3-211ENST00000466054 FER1L6-AS2Q96M78 137 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 ZNF558Q96NG5 402 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 SPAG5Q96R06 1193 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 URM1Q9BTM9 101 aaKnown RBP3.85□□□□□ -1.79
LRCH3-211ENST00000466054 ANAPC5Q9UJX4 755 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 GRID1Q9ULK0 1009 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 RNF150Q9ULK6 438 aa3.85□□□□□ -1.79
LRCH3-211ENST00000466054 A0A1B0GU03 582 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 ENO4A6NNW6 628 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 KLF11O14901 512 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 ARPC2O15144 300 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 TBCAO75347 108 aaKnown RBP3.84□□□□□ -1.79
LRCH3-211ENST00000466054 NADKO95544 446 aaPredicted RBP3.84□□□□□ -1.79
LRCH3-211ENST00000466054 AMBPP02760 352 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 PATE4P0C8F1 98 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 CDH3P22223 829 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 JAK1P23458 1154 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 CDC25CP30307 473 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 CHRNB4P30926 498 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms