RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 CHRM3P20309 590 aa24.86■■□□□ 1.57
U2AF1-206ENST00000464750 ATP5DP30049 168 aa24.86■■□□□ 1.57
U2AF1-206ENST00000464750 CCL11P51671 97 aa24.86■■□□□ 1.57
U2AF1-206ENST00000464750 MLIPQ5VWP3 458 aa24.86■■□□□ 1.57
U2AF1-206ENST00000464750 ZBTB2Q8N680 514 aa24.86■■□□□ 1.57
U2AF1-206ENST00000464750 TEX19Q8NA77 164 aa24.86■■□□□ 1.57
U2AF1-206ENST00000464750 ACTRT1Q8TDG2 376 aa24.86■■□□□ 1.57
U2AF1-206ENST00000464750 DENND1AQ8TEH3 1009 aa24.86■■□□□ 1.57
U2AF1-206ENST00000464750 NDC1Q9BTX1 674 aa24.86■■□□□ 1.57
U2AF1-206ENST00000464750 SLC25A23Q9BV35 468 aa24.86■■□□□ 1.57
U2AF1-206ENST00000464750 INTS10Q9NVR2 710 aaKnown RBP24.86■■□□□ 1.57
U2AF1-206ENST00000464750 GPN3Q9UHW5 284 aaPredicted RBP24.86■■□□□ 1.57
U2AF1-206ENST00000464750 VPS9D1Q9Y2B5 631 aa24.86■■□□□ 1.57
U2AF1-206ENST00000464750 SETXQ7Z333 2677 aaKnown RBP24.86■■□□□ 1.57
U2AF1-206ENST00000464750 GOLGA6L10A0A0M3HER8 536 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 E5RI56 91 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 F7P08709 466 aaPredicted RBP24.85■■□□□ 1.57
U2AF1-206ENST00000464750 FNTAP49354 379 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 DCDP81605 110 aaKnown RBP24.85■■□□□ 1.57
U2AF1-206ENST00000464750 SLC9A5Q14940 896 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 FCRL6Q6DN72 434 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 RAB43Q86YS6 212 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 MCATQ8IVS2 390 aaKnown RBP24.85■■□□□ 1.57
U2AF1-206ENST00000464750 MAGEC3Q8TD91 643 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 GRK7Q8WTQ7 553 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 SPATA7Q9P0W8 599 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 IFT80Q9P2H3 777 aaPredicted RBP24.85■■□□□ 1.57
U2AF1-206ENST00000464750 GALPQ9UBC7 116 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 NDOR1Q9UHB4 597 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 ANKRD12Q6UB98 2062 aa24.85■■□□□ 1.57
U2AF1-206ENST00000464750 MAGEB16A2A368 324 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 PRICKLE3O43900 615 aaPredicted RBP24.84■■□□□ 1.57
U2AF1-206ENST00000464750 KLF7O75840 302 aaPredicted RBP24.84■■□□□ 1.57
U2AF1-206ENST00000464750 FKBP9O95302 570 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 PSMB5P28074 263 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 OTX2P32243 289 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 MAGEA3P43357 314 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 PGDP52209 483 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 ATP1A4Q13733 1029 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 THOC5Q13769 683 aaKnown RBP24.84■■□□□ 1.57
U2AF1-206ENST00000464750 ACSBG2Q5FVE4 666 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 FIGLAQ6QHK4 219 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 NAT8LQ8N9F0 302 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 HMGCLL1Q8TB92 370 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 DLG3Q92796 817 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 KCNF1Q9H3M0 494 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 SNX12Q9UMY4 172 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 PCDHGA9Q9Y5G4 932 aaKnown RBP24.84■■□□□ 1.57
U2AF1-206ENST00000464750 MAD1L1Q9Y6D9 718 aa24.84■■□□□ 1.57
U2AF1-206ENST00000464750 PCM1Q15154 2024 aa24.83■■□□□ 1.57
U2AF1-206ENST00000464750 ZCWPW2A0A1B0GU75 182 aa24.83■■□□□ 1.57
U2AF1-206ENST00000464750 CTAGE9A4FU28 777 aa24.83■■□□□ 1.57
U2AF1-206ENST00000464750 KIF5CO60282 957 aa24.83■■□□□ 1.57
U2AF1-206ENST00000464750 MATN4O95460 622 aa24.83■■□□□ 1.57
U2AF1-206ENST00000464750 GRIA3P42263 894 aa24.83■■□□□ 1.57
U2AF1-206ENST00000464750 NKAIN1Q4KMZ8 207 aa24.83■■□□□ 1.57
U2AF1-206ENST00000464750 ZC3H12BQ5HYM0 836 aaKnown RBP24.83■■□□□ 1.57
U2AF1-206ENST00000464750 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.83■■□□□ 1.57
U2AF1-206ENST00000464750 DENND6AQ8IWF6 608 aa24.83■■□□□ 1.57
U2AF1-206ENST00000464750 AGGF1Q8N302 714 aaeCLIP24.83■■□□□ 1.57
U2AF1-206ENST00000464750 MIPEPQ99797 713 aa24.83■■□□□ 1.57
U2AF1-206ENST00000464750 FBXO6Q9NRD1 293 aaPredicted RBP24.83■■□□□ 1.57
U2AF1-206ENST00000464750 TRMT1Q9NXH9 659 aaKnown RBP24.83■■□□□ 1.57
U2AF1-206ENST00000464750 PTRH2Q9Y3E5 179 aaKnown RBP24.83■■□□□ 1.57
U2AF1-206ENST00000464750 SPENQ96T58 3664 aaKnown RBP24.83■■□□□ 1.56
U2AF1-206ENST00000464750 ARHGEF33A8MVX0 844 aa24.82■■□□□ 1.56
U2AF1-206ENST00000464750 ZNF185O15231 689 aa24.82■■□□□ 1.56
U2AF1-206ENST00000464750 USP1O94782 785 aa24.82■■□□□ 1.56
U2AF1-206ENST00000464750 FOLR3P41439 243 aa24.82■■□□□ 1.56
U2AF1-206ENST00000464750 GCGRP47871 477 aa24.82■■□□□ 1.56
U2AF1-206ENST00000464750 FOXK1P85037 733 aa24.82■■□□□ 1.56
U2AF1-206ENST00000464750 NUP210LQ5VU65 1888 aa24.82■■□□□ 1.56
U2AF1-206ENST00000464750 PPIL6Q8IXY8 311 aa24.82■■□□□ 1.56
U2AF1-206ENST00000464750 TMEM102Q8N9M5 508 aaPredicted RBP24.82■■□□□ 1.56
U2AF1-206ENST00000464750 MLXIPLQ9NP71 852 aa24.82■■□□□ 1.56
U2AF1-206ENST00000464750 A0A1W2PPV9 198 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 CES2O00748 559 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 CNOT3O75175 753 aaKnown RBP24.81■■□□□ 1.56
U2AF1-206ENST00000464750 CEACAM4O75871 244 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 MCM3P25205 808 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 SLC1A2P43004 574 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 CLCN7P51798 805 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 ARSFP54793 590 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 RRADP55042 308 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 CTBP1Q13363 440 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 FASTKQ14296 549 aaKnown RBP24.81■■□□□ 1.56
U2AF1-206ENST00000464750 PPP1R7Q15435 360 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 LONRF1Q17RB8 773 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 KLHL38Q2WGJ6 581 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 TTLL10Q6ZVT0 673 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 MED25Q71SY5 747 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 MRGPREQ86SM8 312 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 OR2L3Q8NG85 312 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 ZUFSPQ96AP4 578 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 SLC30A3Q99726 388 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 SELENOSQ9BQE4 189 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 CCDC68Q9H2F9 335 aa24.81■■□□□ 1.56
U2AF1-206ENST00000464750 C20orf96Q9NUD7 363 aaPredicted RBP24.81■■□□□ 1.56
U2AF1-206ENST00000464750 A0A1B0GX78 115 aa24.8■■□□□ 1.56
U2AF1-206ENST00000464750 TARM1B6A8C7 271 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms