RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 COQ3Q9NZJ6 369 aa12.04□□□□□ -0.48
SNX17-205ENST00000464279 PAK5Q9P286 719 aa12.04□□□□□ -0.48
SNX17-205ENST00000464279 IFT80Q9P2H3 777 aaPredicted RBP12.04□□□□□ -0.48
SNX17-205ENST00000464279 ATXN10Q9UBB4 475 aa12.04□□□□□ -0.48
SNX17-205ENST00000464279 RNF14Q9UBS8 474 aa12.04□□□□□ -0.48
SNX17-205ENST00000464279 SLC23A2Q9UGH3 650 aa12.04□□□□□ -0.48
SNX17-205ENST00000464279 ZNF835Q9Y2P0 537 aa12.04□□□□□ -0.48
SNX17-205ENST00000464279 TLN2Q9Y4G6 2542 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 C1orf232A0A0U1RR37 186 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 ZNF749O43361 778 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 VEGFDO43915 354 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 CLDN7O95471 211 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 AP2A1O95782 977 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 PIRTP0C851 137 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 SPTBP11277 2137 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 FDFT1P37268 417 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 SPAM1P38567 509 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 PAFAH1B1P43034 410 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 STC1P52823 247 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 DRG2P55039 364 aaKnown RBP12.03□□□□□ -0.48
SNX17-205ENST00000464279 FOXL2P58012 376 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 PTSQ03393 145 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 OLIG2Q13516 323 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 CCDC137Q6PK04 289 aaKnown RBP12.03□□□□□ -0.48
SNX17-205ENST00000464279 WASH2PQ6VEQ5 465 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 RANBP10Q6VN20 620 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 OOSP2Q86WS3 158 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 SPPL2CQ8IUH8 684 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 SRPK1Q96SB4 655 aaKnown RBP12.03□□□□□ -0.48
SNX17-205ENST00000464279 TBL1YQ9BQ87 522 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 APOL2Q9BQE5 337 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 POLDIP3Q9BY77 421 aaKnown RBP12.03□□□□□ -0.48
SNX17-205ENST00000464279 OR2AG1Q9H205 316 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 ZNF395Q9H8N7 513 aaPredicted RBP12.03□□□□□ -0.48
SNX17-205ENST00000464279 ETNK1Q9HBU6 452 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 RAB6BQ9NRW1 208 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 ZNF358Q9NW07 568 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 HRASLS2Q9NWW9 162 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 STMN3Q9NZ72 180 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 SERTAD3Q9UJW9 196 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 ZNF711Q9Y462 761 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 SPO11Q9Y5K1 396 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 DOCK10Q96BY6 2186 aa12.03□□□□□ -0.48
SNX17-205ENST00000464279 FADS2P1A8MWK0 482 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 GPR89AB7ZAQ6 455 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 PSMD3O43242 534 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 CNOT3O75175 753 aaKnown RBP12.02□□□□□ -0.49
SNX17-205ENST00000464279 KLHL18O94889 574 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 MSL3P1P0C860 447 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 GPR89BP0CG08 455 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 CBSLP0DN79 551 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 ZNF7P17097 686 aaPredicted RBP12.02□□□□□ -0.49
SNX17-205ENST00000464279 IDSP22304 550 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 MMP11P24347 488 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 CBSP35520 551 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 HALP42357 657 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 PREPP48147 710 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 SPARCL1Q14515 664 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 KCTD19Q17RG1 926 aaPredicted RBP12.02□□□□□ -0.49
SNX17-205ENST00000464279 DENND5AQ6IQ26 1287 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 ARMC6Q6NXE6 501 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 FBXO38Q6PIJ6 1188 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 C4orf22Q6V702 233 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 GPR150Q8NGU9 434 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 CCHCR1Q8TD31 782 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 LRRC45Q96CN5 670 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 EID2BQ96D98 161 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 TIMM29Q9BSF4 260 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 DDX47Q9H0S4 455 aaKnown RBP12.02□□□□□ -0.49
SNX17-205ENST00000464279 LRRC40Q9H9A6 602 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 ZFYVE1Q9HBF4 777 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 ARNT2Q9HBZ2 717 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 CDC23Q9UJX2 597 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 SHOC2Q9UQ13 582 aa12.02□□□□□ -0.49
SNX17-205ENST00000464279 INTS1Q8N201 2190 aaKnown RBP12.01□□□□□ -0.49
SNX17-205ENST00000464279 C17orf113A0A1B0GUU1 675 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 ERI2A8K979 691 aaKnown RBP12.01□□□□□ -0.49
SNX17-205ENST00000464279 E7EVH7 732 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 E9PLN8 166 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 AURKAO14965 403 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 KMOO15229 486 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 SUN1O94901 812 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 KRT14P02533 472 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 SLC4A1P02730 911 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 MSX1P28360 303 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 SPINT3P49223 89 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 KPNA2P52292 529 aaKnown RBP12.01□□□□□ -0.49
SNX17-205ENST00000464279 BASP1P80723 227 aaKnown RBP12.01□□□□□ -0.49
SNX17-205ENST00000464279 DCDP81605 110 aaKnown RBP12.01□□□□□ -0.49
SNX17-205ENST00000464279 SLC9A5Q14940 896 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 TRIP13Q15645 432 aaPredicted RBP12.01□□□□□ -0.49
SNX17-205ENST00000464279 C1orf189Q5VU69 101 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 TMC3Q7Z5M5 1100 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 LRRTM4Q86VH4 590 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 RAVER1Q8IY67 606 aaKnown RBP12.01□□□□□ -0.49
SNX17-205ENST00000464279 EID3Q8N140 333 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 AGAP11Q8TF27 550 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 GRK7Q8WTQ7 553 aa12.01□□□□□ -0.49
SNX17-205ENST00000464279 THAP3Q8WTV1 239 aaPredicted RBP12.01□□□□□ -0.49
SNX17-205ENST00000464279 PPM1MQ96MI6 270 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms