RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 PAOXQ6QHF9 649 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 TRIM59Q8IWR1 403 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 ATPAF2Q8N5M1 289 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 ZNF653Q96CK0 615 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 SELENOOQ9BVL4 669 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 XPO4Q9C0E2 1151 aaKnown RBP12.64□□□□□ -0.39
C9orf3-211ENST00000463372 PNPLA3Q9NST1 481 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 TMPRSS11EQ9UL52 423 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 SHOC2Q9UQ13 582 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 A0A087X1B8 175 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 A0A1W2PPR1 153 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 KLHL33A6NCF5 533 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 GABRR3A8MPY1 467 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 A8MV72 311 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-211ENST00000463372 NPIPA2E9PIF3 369 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 NPIPA3F8WFD2 350 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 NEURL1O76050 574 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 DESP17661 470 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 CFPP27918 469 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 ADH7P40394 386 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 SYKP43405 635 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 STX17P56962 302 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 SRSF2Q01130 221 aaKnown RBP12.63□□□□□ -0.39
C9orf3-211ENST00000463372 DSC2Q02487 901 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 MESDQ14696 234 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 COBLL1Q53SF7 1204 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 FNBP1LQ5T0N5 605 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 WDR59Q6PJI9 974 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 KIF18BQ86Y91 864 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 CRLF3Q8IUI8 442 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 AMER2Q8N7J2 671 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 MAPK1IP1LQ8NDC0 245 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 OR5M9Q8NGP3 310 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 LINC01560Q8TB33 94 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 SLCO2A1Q92959 643 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 IMMP1LQ96LU5 166 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 OR2A14Q96R47 310 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 SH3GL2Q99962 352 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 C11orf70Q9BRQ4 267 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 CCM2Q9BSQ5 444 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 KCNK13Q9HB14 408 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 RMND1Q9NWS8 449 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 TTLL3Q9Y4R7 772 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 TENM1Q9UKZ4 2725 aa12.63□□□□□ -0.39
C9orf3-211ENST00000463372 LOC102723996A0A087X1L8 192 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 ANKRD62A6NC57 917 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 PRKCSHP14314 528 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-211ENST00000463372 FPR1P21462 350 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 MCM3P25205 808 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 RFC3P40938 356 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 TAZQ16635 292 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 BTBD16Q32M84 506 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 PPP6R3Q5H9R7 873 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-211ENST00000463372 TCTE1Q5JU00 501 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 LDLRAP1Q5SW96 308 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 ZNF658Q5TYW1 1059 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-211ENST00000463372 H3F3CQ6NXT2 135 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 FAM71AQ8IYT1 594 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 OR2L2Q8NH16 312 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 YIPF2Q9BWQ6 316 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 ADGRE3Q9BY15 652 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 GPR63Q9BZJ6 419 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 HAUS2Q9NVX0 235 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 DNAJC12Q9UKB3 198 aa12.62□□□□□ -0.39
C9orf3-211ENST00000463372 PSMA7O14818 248 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 PRPSAP2O60256 369 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 FBLP22087 321 aaKnown RBP12.61□□□□□ -0.39
C9orf3-211ENST00000463372 MMP8P22894 467 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 ZNF143P52747 638 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-211ENST00000463372 TNK1Q13470 666 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 IHHQ14623 411 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 CA9Q16790 459 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 LONRF2Q1L5Z9 754 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 UBAP2Q5T6F2 1119 aaKnown RBP12.61□□□□□ -0.39
C9orf3-211ENST00000463372 C12orf54Q6X4T0 127 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 GBP6Q6ZN66 633 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 TMC3Q7Z5M5 1100 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 DTWD1Q8N5C7 304 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 SGMS2Q8NHU3 365 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 PLCD4Q9BRC7 762 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 GSX2Q9BZM3 304 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 ADAM19Q9H013 955 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 MTRF1LQ9UGC7 380 aaKnown RBP12.61□□□□□ -0.39
C9orf3-211ENST00000463372 FAM215AQ9Y5M1 114 aa12.61□□□□□ -0.39
C9orf3-211ENST00000463372 IGLV3-12A0A075B6K2 115 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 KLRC4-KLRK1H3BQV0 150 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 IFRD1O00458 451 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-211ENST00000463372 DVL2O14641 736 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 BCKDKO14874 412 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 GNA14O95837 355 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 CMA1P23946 247 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 THBS2P35442 1172 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 PTH2RP49190 550 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 PRKG2Q13237 762 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 PLAG1Q6DJT9 500 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 PRMT9Q6P2P2 845 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 CFAP206Q8IYR0 622 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 TEX26Q8N6G2 289 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 CREB3L4Q8TEY5 395 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms