RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 GJA8P48165 433 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 IDH2P48735 452 aaKnown RBP12.14□□□□□ -0.47
HDAC4-208ENST00000463007 MVKQ03426 396 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 CARD16Q5EG05 197 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 ZCCHC8Q6NZY4 707 aaKnown RBP12.14□□□□□ -0.47
HDAC4-208ENST00000463007 PLEKHG7Q6ZR37 379 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 B3GNT8Q7Z7M8 397 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 LEMD2Q8NC56 503 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 PAPD5Q8NDF8 572 aaKnown RBP12.14□□□□□ -0.47
HDAC4-208ENST00000463007 DMRTB1Q96MA1 342 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 CEP295NLQ96MC4 621 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 CINPQ9BW66 212 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-208ENST00000463007 BOCQ9BWV1 1114 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 VN1R3Q9BXE9 311 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 WWOXQ9NZC7 414 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 ZNF490Q9ULM2 529 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-208ENST00000463007 C2orf81A6NN90 581 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 GLUD1P00367 558 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 SPNP16150 400 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 ZNF24P17028 368 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 HLA-DPA1P20036 260 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 SERPINB10P48595 397 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 ZNF140P52738 457 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-208ENST00000463007 COPZ1P61923 177 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 PPP2R2BQ00005 443 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 TUBA3CQ13748 450 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 SLC8B1Q6J4K2 584 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 STARD8Q92502 1023 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 GTF2H4Q92759 462 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 EBPLQ9BY08 206 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 YTHDF1Q9BYJ9 559 aaKnown RBP12.14□□□□□ -0.47
HDAC4-208ENST00000463007 CIPCQ9C0C6 399 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 C14orf119Q9NWQ9 140 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 SCN3BQ9NY72 215 aa12.14□□□□□ -0.47
HDAC4-208ENST00000463007 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-208ENST00000463007 SLC38A8A6NNN8 435 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 EFCAB9A8MZ26 197 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 ADAM12O43184 909 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 PRAMEF12O95522 483 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 CPSF4O95639 269 aaKnown RBP12.13□□□□□ -0.47
HDAC4-208ENST00000463007 FGF1P05230 155 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 GALTP07902 379 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 ALPIP09923 528 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 POU2F1P14859 743 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 FAM214AQ32MH5 1076 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 XKR7Q5GH72 579 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 UBE2UQ5VVX9 321 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 DOK6Q6PKX4 331 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 ZNF548Q8NEK5 533 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-208ENST00000463007 DBF4BQ8NFT6 615 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 TM6SF2Q9BZW4 377 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 RUBCNLQ9H714 662 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 PARVBQ9HBI1 364 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 POPDC3Q9HBV1 291 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 AKIP1Q9NQ31 210 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 ZIM2Q9NZV7 527 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 SCHIP1Q9P0W5 487 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-208ENST00000463007 BOLA1Q9Y3E2 137 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 PCDHGA10Q9Y5H3 936 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 F11P03951 625 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 ALDH2P05091 517 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 C7P10643 843 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 TNFRSF1BP20333 461 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 CDKN2CP42773 168 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 RPS3AP61247 264 aaKnown RBP12.13□□□□□ -0.47
HDAC4-208ENST00000463007 ATAD3BQ5T9A4 648 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 RSBN1Q5VWQ0 802 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-208ENST00000463007 SUSD1Q6UWL2 747 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 UBE2J2Q8N2K1 259 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 TMEM175Q9BSA9 504 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 BRINP2Q9C0B6 783 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 DCSTAMPQ9H295 470 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 ZNF639Q9UID6 485 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 EIF3LQ9Y262 564 aaKnown RBP12.13□□□□□ -0.47
HDAC4-208ENST00000463007 SAMHD1Q9Y3Z3 626 aaKnown RBP12.13□□□□□ -0.47
HDAC4-208ENST00000463007 PCDHB9Q9Y5E1 797 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 LTBP2Q14767 1821 aa12.13□□□□□ -0.47
HDAC4-208ENST00000463007 PFDN6O15212 129 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 SSX4O60224 188 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 ULK1O75385 1050 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 PRLP01236 227 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 CHRM5P08912 532 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 JUNBP17275 347 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 PCMT1P22061 227 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 ILF2Q12905 390 aaKnown RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 DUSP4Q13115 394 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 SLC14A1Q13336 389 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 PHKG1Q16816 387 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 HORMAD1Q86X24 394 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 SCAIQ8N9R8 606 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 TTC29Q8NA56 475 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-208ENST00000463007 PIK3C3Q8NEB9 887 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 CD200R1Q8TD46 325 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 KCNC2Q96PR1 638 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 PSKH2Q96QS6 385 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 CWH43Q9H720 699 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 RAD51BO15315 384 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 AOC2O75106 756 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 NDST3O95803 873 aa12.12□□□□□ -0.47
HDAC4-208ENST00000463007 HMGA1P17096 107 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms