RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 PCYOX1Q9UHG3 505 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 TCFL5Q9UL49 500 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 SRPK3Q9UPE1 567 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 PLCL2Q9UPR0 1127 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 FARSAQ9Y285 508 aaKnown RBP9.79□□□□□ -0.84
SF3A3-204ENST00000462258 TP53TG5Q9Y2B4 290 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 PADI2Q9Y2J8 665 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 KLHL20Q9Y2M5 609 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 AP1M2Q9Y6Q5 423 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 TNRC6AQ8NDV7 1962 aaKnown RBP9.78□□□□□ -0.84
SF3A3-204ENST00000462258 ARGFXA6NJG6 315 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 ARHGEF33A8MVX0 844 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 MKRN2OSH3BPM6 223 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 SUV39H1O43463 412 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 DNAJB5O75953 348 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 FKBP9O95302 570 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 MATN4O95460 622 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 CATP04040 527 aaKnown RBP9.78□□□□□ -0.84
SF3A3-204ENST00000462258 CAPN1P07384 714 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 PGAM1P18669 254 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 PTGIRP43119 386 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 CLCN7P51798 805 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 GNG11P61952 73 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 MPP1Q00013 466 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 DHX9Q08211 1270 aaKnown RBP9.78□□□□□ -0.84
SF3A3-204ENST00000462258 CTBP1Q13363 440 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 SF1Q15637 639 aaKnown RBP9.78□□□□□ -0.84
SF3A3-204ENST00000462258 KLHL38Q2WGJ6 581 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 C1orf189Q5VU69 101 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 FAM69BQ5VUD6 431 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 FCRL6Q6DN72 434 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 TLDC1Q6P9B6 456 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 PCGF5Q86SE9 256 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 KCNMB4Q86W47 210 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 APLFQ8IW19 511 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-204ENST00000462258 DNAJC22Q8N4W6 341 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 ZNF655Q8N720 491 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-204ENST00000462258 HMGCLL1Q8TB92 370 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 CALML6Q8TD86 181 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 ADAMTS17Q8TE56 1095 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 KCNJ9Q92806 393 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 SIGLEC10Q96LC7 697 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 GBP5Q96PP8 586 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 SLC30A3Q99726 388 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 NAPGQ99747 312 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-204ENST00000462258 C17orf62Q9BQA9 187 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 TRIM55Q9BYV6 548 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 SPRTNQ9H040 489 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-204ENST00000462258 FAM114A2Q9NRY5 505 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 EURLQ9NYK6 297 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 GALPQ9UBC7 116 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 DHCR7Q9UBM7 475 aaKnown RBP9.78□□□□□ -0.84
SF3A3-204ENST00000462258 PYCARDQ9ULZ3 195 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 PCSK5Q92824 1860 aa9.78□□□□□ -0.84
SF3A3-204ENST00000462258 CCDC88CQ9P219 2028 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 MYO1CO00159 1063 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 PRICKLE3O43900 615 aaPredicted RBP9.77□□□□□ -0.85
SF3A3-204ENST00000462258 PSIP1O75475 530 aaKnown RBP9.77□□□□□ -0.85
SF3A3-204ENST00000462258 BANF1O75531 89 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 CBSLP0DN79 551 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 ERGP11308 486 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 ENO3P13929 434 aaPredicted RBP9.77□□□□□ -0.85
SF3A3-204ENST00000462258 NR1D1P20393 614 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 CBSP35520 551 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 DR1Q01658 176 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 CHAF1BQ13112 559 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 CUL1Q13616 776 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 SLC9A5Q14940 896 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 HSP90AA5PQ58FG0 334 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 PAPD7Q5XG87 772 aaKnown RBP9.77□□□□□ -0.85
SF3A3-204ENST00000462258 ZNF549Q6P9A3 640 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 NEK10Q6ZWH5 1172 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 RAB43Q86YS6 212 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 KLHL7Q8IXQ5 586 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 OR2L3Q8NG85 312 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 CD200R1Q8TD46 325 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 DLG3Q92796 817 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 RUNDC3BQ96NL0 473 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 MIPEPQ99797 713 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 SELENOSQ9BQE4 189 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 NDC1Q9BTX1 674 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 DHRS4Q9BTZ2 278 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 ACSS2Q9NR19 701 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 IARS2Q9NSE4 1012 aaKnown RBP9.77□□□□□ -0.85
SF3A3-204ENST00000462258 NDOR1Q9UHB4 597 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 GPN3Q9UHW5 284 aaPredicted RBP9.77□□□□□ -0.85
SF3A3-204ENST00000462258 FBXO5Q9UKT4 447 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 MED16Q9Y2X0 877 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 SAR1BQ9Y6B6 198 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 COMMD10Q9Y6G5 202 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 FAM169AQ9Y6X4 670 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 MYO18BQ8IUG5 2567 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 SEC16AO15027 2179 aa9.77□□□□□ -0.85
SF3A3-204ENST00000462258 HEATR5BQ9P2D3 2071 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 UBR5O95071 2799 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-204ENST00000462258 MED13Q9UHV7 2174 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 A0A1B0GX78 115 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 A0A1W2PPV9 198 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 NRP2O60462 931 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 VPS26AO75436 327 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms