RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ISLR2Q6UXK2 745 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 UNC5DQ6UXZ4 953 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 ARHGEF18Q6ZSZ5 1173 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 FAM20CQ8IXL6 584 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 SRRM1Q8IYB3 904 aaKnown RBP9.99□□□□□ -0.81
HDLBP-227ENST00000458564 CCDC170Q8IYT3 715 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 BCORP1Q8N888 145 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 OR13J1Q8NGT2 312 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 OR2L8Q8NGY9 312 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 ALS2CR12Q96Q35 445 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 LMF1Q96S06 567 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 RIMKLBQ9ULI2 386 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 PCDHA13Q9Y5I0 950 aa9.99□□□□□ -0.81
HDLBP-227ENST00000458564 ZGRF1Q86YA3 2104 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 AKAP9Q99996 3911 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 CELSR1Q9NYQ6 3014 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 CCDC162PA2VCL2 907 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 OR51F1A6NGY5 319 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 TARM1B6A8C7 271 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 PSMD3O43242 534 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 PRICKLE3O43900 615 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-227ENST00000458564 OR1I1O60431 355 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 HPP00738 406 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 ATXN8OSP0DMR3 200 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 FDXRP22570 491 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 MCM3P25205 808 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 CCR7P32248 378 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 CETN2P41208 172 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 TDGF1P3P51864 188 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 RWDD2BP57060 319 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 ACVR1Q04771 509 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 Q0VFX4 171 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 RBBP7Q16576 425 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 FAM214AQ32MH5 1076 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 FIGLAQ6QHK4 219 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 AFTPHQ6ULP2 937 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 NAPRTQ6XQN6 538 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 NLRP9Q7RTR0 991 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 LINC00523Q86TU6 105 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 VRK3Q8IV63 474 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 TC2NQ8N9U0 490 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 TTC29Q8NA56 475 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-227ENST00000458564 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-227ENST00000458564 ASZ1Q8WWH4 475 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 ALG3Q92685 438 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 RELTQ969Z4 430 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 ZUFSPQ96AP4 578 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 MOCOSQ96EN8 888 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 THOC3Q96J01 351 aaKnown RBP9.98□□□□□ -0.81
HDLBP-227ENST00000458564 CNDP1Q96KN2 507 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 TTC1Q99614 292 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 SELENOSQ9BQE4 189 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 RAB11FIP5Q9BXF6 653 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 SOX17Q9H6I2 414 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-227ENST00000458564 OLAHQ9NV23 265 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 TFR2Q9UP52 801 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 KLHL20Q9Y2M5 609 aa9.98□□□□□ -0.81
HDLBP-227ENST00000458564 KLF2Q9Y5W3 355 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-227ENST00000458564 POLQO75417 2590 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 IGLV3-12A0A075B6K2 115 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 ARHGAP10A1A4S6 786 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 ERI2A8K979 691 aaKnown RBP9.97□□□□□ -0.81
HDLBP-227ENST00000458564 RASGRF2O14827 1237 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 PCDH17O14917 1159 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 SRPX2O60687 465 aaPredicted RBP9.97□□□□□ -0.81
HDLBP-227ENST00000458564 JRKO75564 520 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 USP1O94782 785 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 SLCO2B1O94956 709 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 ACPPP15309 386 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 SOX11P35716 441 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 CARSP49589 748 aaKnown RBP9.97□□□□□ -0.81
HDLBP-227ENST00000458564 HSPA14Q0VDF9 509 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 KLF1Q13351 362 aaPredicted RBP9.97□□□□□ -0.81
HDLBP-227ENST00000458564 ART3Q13508 389 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 NAA30Q147X3 362 aaPredicted RBP9.97□□□□□ -0.81
HDLBP-227ENST00000458564 SPA17Q15506 151 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 ATG9BQ674R7 924 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 PRMT9Q6P2P2 845 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 SHISA6Q6ZSJ9 500 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 PARP9Q8IXQ6 854 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 FAM71DQ8N9W8 422 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 LMNTD1Q8N9Z9 388 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 HMGCLL1Q8TB92 370 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 NR4A3Q92570 626 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 PEX13Q92968 403 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 CRB3Q9BUF7 120 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 CARD6Q9BX69 1037 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 TSSK1BQ9BXA7 367 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 UNKQ9C0B0 810 aaKnown RBP9.97□□□□□ -0.81
HDLBP-227ENST00000458564 RUBCNLQ9H714 662 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 PIH1D1Q9NWS0 290 aaKnown RBP9.97□□□□□ -0.81
HDLBP-227ENST00000458564 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.97□□□□□ -0.81
HDLBP-227ENST00000458564 IMPACTQ9P2X3 320 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 PDZD2O15018 2839 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 F8P00451 2351 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 C2CD3Q4AC94 2353 aa9.97□□□□□ -0.81
HDLBP-227ENST00000458564 DCHS2Q6V1P9 2916 aa9.96□□□□□ -0.81
HDLBP-227ENST00000458564 TRAV17A0A0B4J275 112 aa9.96□□□□□ -0.82
HDLBP-227ENST00000458564 RCCD1A6NED2 376 aa9.96□□□□□ -0.82
HDLBP-227ENST00000458564 GOLGA6L9A6NEM1 432 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms