RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 CDKL4Q5MAI5 379 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 HHATQ5VTY9 493 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 CAPN13Q6MZZ7 669 aaPredicted RBP13.68□□□□□ -0.22
LINC00887-204ENST00000456816 SUSD1Q6UWL2 747 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 ZYG11AQ6WRX3 759 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 USP53Q70EK8 1073 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 SLC22A9Q8IVM8 553 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 SNX31Q8N9S9 440 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 PDPRQ8NCN5 879 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 BAHD1Q8TBE0 780 aaPredicted RBP13.68□□□□□ -0.22
LINC00887-204ENST00000456816 MGARPQ8TDB4 240 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 PYCR2Q96C36 320 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 RHBDF1Q96CC6 855 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 GFM1Q96RP9 751 aaKnown RBP13.68□□□□□ -0.22
LINC00887-204ENST00000456816 LRRN3Q9H3W5 708 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 ACTR10Q9NZ32 417 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 ANGPTL3Q9Y5C1 460 aa13.68□□□□□ -0.22
LINC00887-204ENST00000456816 ARHGEF17Q96PE2 2063 aaPredicted RBP13.68□□□□□ -0.22
LINC00887-204ENST00000456816 A8MT66 165 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 MATN2O00339 956 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 BTN3A3O00478 584 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 SLC30A4O14863 429 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 B4GAT1O43505 415 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 RFPL3O75679 317 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 STK16O75716 305 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 IPO13O94829 963 aaKnown RBP13.67□□□□□ -0.22
LINC00887-204ENST00000456816 WDR47O94967 919 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 GP1BAP07359 652 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 CCND1P24385 295 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 EEF1DP29692 281 aaKnown RBP13.67□□□□□ -0.22
LINC00887-204ENST00000456816 NOVA1P51513 510 aaKnown RBP13.67□□□□□ -0.22
LINC00887-204ENST00000456816 KIR2DS3Q14952 304 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 SETDB1Q15047 1291 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 PTCHD3Q3KNS1 767 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 PLXDC1Q8IUK5 500 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 ADGRF3Q8IZF5 1079 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 LINC01555Q8NAE3 123 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 PPP4R1Q8TF05 950 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 SLC22A18Q96BI1 424 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 CCDC126Q96EE4 140 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 ZDHHC12Q96GR4 267 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 TGM7Q96PF1 710 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 ACAT2Q9BWD1 397 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 MLXIPLQ9NP71 852 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 OPTCQ9UBM4 332 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 KLHL3Q9UH77 587 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 TAC3Q9UHF0 121 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 PTBP2Q9UKA9 531 aaKnown RBP13.67□□□□□ -0.22
LINC00887-204ENST00000456816 DYRK1BQ9Y463 629 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 PCDHB11Q9Y5F2 797 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 TNPO3Q9Y5L0 923 aaKnown RBP13.67□□□□□ -0.22
LINC00887-204ENST00000456816 ENTPD2Q9Y5L3 495 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 FRYLO94915 3013 aa13.67□□□□□ -0.22
LINC00887-204ENST00000456816 SPAARA0A1B0GVQ0 90 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 E7ENX8 843 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 CAPN5O15484 640 aaPredicted RBP13.66□□□□□ -0.22
LINC00887-204ENST00000456816 DLX3O60479 287 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 RASSF9O75901 435 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 CCNDBP1O95273 360 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 ERGP11308 486 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 MTHFD2P13995 350 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 UGT2B7P16662 529 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 CSRP1P21291 193 aaKnown RBP13.66□□□□□ -0.22
LINC00887-204ENST00000456816 SDHBP21912 280 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 PSMB5P28074 263 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 CD1CP29017 333 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 OAS2P29728 719 aaKnown RBP13.66□□□□□ -0.22
LINC00887-204ENST00000456816 ARL1P40616 181 aaPredicted RBP13.66□□□□□ -0.22
LINC00887-204ENST00000456816 GDF5P43026 501 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 AGTR2P50052 363 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 SIM1P81133 766 aaPredicted RBP13.66□□□□□ -0.22
LINC00887-204ENST00000456816 TAP2Q03519 686 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 ASPHQ12797 758 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 ILKQ13418 452 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 SPIDRQ14159 915 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 SF1Q15637 639 aaKnown RBP13.66□□□□□ -0.22
LINC00887-204ENST00000456816 RSPO4Q2I0M5 234 aaPredicted RBP13.66□□□□□ -0.22
LINC00887-204ENST00000456816 CFAP157Q5JU67 520 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 SNAP47Q5SQN1 464 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 PRAMEF13Q5VWM6 474 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 FAM92BQ6ZTR7 304 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 CCNYL1Q8N7R7 359 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 PPP1R14CQ8TAE6 165 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 HMGCLL1Q8TB92 370 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 UBTD2Q8WUN7 234 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 ESAMQ96AP7 390 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 MIPEPQ99797 713 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 TMEM79Q9BSE2 394 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 MENTQ9BUN1 341 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 PCBD2Q9H0N5 130 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 DNAJC11Q9NVH1 559 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 SPHK1Q9NYA1 384 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 OGFRQ9NZT2 677 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 COPG2Q9UBF2 871 aa13.66□□□□□ -0.22
LINC00887-204ENST00000456816 ATXN7L1Q9ULK2 861 aaPredicted RBP13.66□□□□□ -0.22
LINC00887-204ENST00000456816 COL5A1P20908 1838 aaPredicted RBP13.66□□□□□ -0.22
LINC00887-204ENST00000456816 WDR91A4D1P6 747 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 TARM1B6A8C7 271 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 G3V2L1 256 aa13.65□□□□□ -0.22
LINC00887-204ENST00000456816 STX16-NPEPL1H3BU86 382 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms