RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TRIM59Q8IWR1 403 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 NPWQ8N729 165 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 MDS2Q8NDY4 140 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 ACVR1CQ8NER5 493 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 JOSD2Q8TAC2 188 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 BRSK1Q8TDC3 778 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 LCN9Q8WX39 176 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 SCMH1Q96GD3 660 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 CCDC34Q96HJ3 373 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 VPS35Q96QK1 796 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 PIP5K1AQ99755 562 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 TUBGCP2Q9BSJ2 902 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 TDRD1Q9BXT4 1180 aaKnown RBP7.5□□□□□ -1.21
LINC01961-201ENST00000449954 AMBRA1Q9C0C7 1298 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 XPO4Q9C0E2 1151 aaKnown RBP7.5□□□□□ -1.21
LINC01961-201ENST00000449954 POLR1EQ9GZS1 481 aaKnown RBP7.5□□□□□ -1.21
LINC01961-201ENST00000449954 SCAND2PQ9GZW5 306 aaPredicted RBP7.5□□□□□ -1.21
LINC01961-201ENST00000449954 KLHL25Q9H0H3 589 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 FAM60AQ9NP50 221 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 ZFP64Q9NPA5 681 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 DTLQ9NZJ0 730 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 IL1RAPL1Q9NZN1 696 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 HPSEQ9Y251 543 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.5□□□□□ -1.21
LINC01961-201ENST00000449954 ALG6Q9Y672 507 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 PHF3Q92576 2039 aaKnown RBP7.49□□□□□ -1.21
LINC01961-201ENST00000449954 A0A1B0GVL5 298 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 BTN3A1O00481 513 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 DDX3XO00571 662 aaKnown RBP eCLIP7.49□□□□□ -1.21
LINC01961-201ENST00000449954 PSMA7O14818 248 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 DSCR3O14972 297 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 SMPD2O60906 423 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 GNA14O95837 355 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 SLC35G4P0C7Q5 338 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 DESP17661 470 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 ERCC2P18074 760 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 GPD1P21695 349 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 CXCR2P25025 360 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 SYKP43405 635 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 CDH6P55285 790 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 NOMO3P69849 1222 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 FANCCQ00597 558 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 DMTNQ08495 405 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 AP1B1Q10567 949 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 PMPCAQ10713 525 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 TMEM115Q12893 351 aaPredicted RBP7.49□□□□□ -1.21
LINC01961-201ENST00000449954 NFE2L1Q14494 772 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 KHDC1Q4VXA5 237 aaKnown RBP7.49□□□□□ -1.21
LINC01961-201ENST00000449954 ZNF658Q5TYW1 1059 aaPredicted RBP7.49□□□□□ -1.21
LINC01961-201ENST00000449954 YOD1Q5VVQ6 348 aaPredicted RBP7.49□□□□□ -1.21
LINC01961-201ENST00000449954 ALS2CLQ60I27 953 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 METRNLQ641Q3 311 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 ATL3Q6DD88 541 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 SPESP1Q6UW49 350 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 FAM83HQ6ZRV2 1179 aaPredicted RBP7.49□□□□□ -1.21
LINC01961-201ENST00000449954 Q6ZS46 218 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 RFX8Q6ZV50 586 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 TTLL10Q6ZVT0 673 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 YTHDF3Q7Z739 585 aaKnown RBP7.49□□□□□ -1.21
LINC01961-201ENST00000449954 MCATQ8IVS2 390 aaKnown RBP7.49□□□□□ -1.21
LINC01961-201ENST00000449954 HORMAD2Q8N7B1 307 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 LPCAT1Q8NF37 534 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 UBASH3BQ8TF42 649 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 C8orf44Q96CB5 159 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 CEP41Q9BYV8 373 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 DEF6Q9H4E7 631 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 KLHL1Q9NR64 748 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 HAUS2Q9NVX0 235 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 C3orf18Q9UK00 162 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 ACSL5Q9ULC5 683 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 PLCL2Q9UPR0 1127 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 ARID1AO14497 2285 aa7.49□□□□□ -1.21
LINC01961-201ENST00000449954 IGHV1-45A0A0A0MS14 117 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 TRIM64A6NGJ6 449 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 TRIM64BA6NI03 449 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 CLDN4O14493 209 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 ZNHIT1O43257 154 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 ICMTO60725 284 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 POP7O75817 140 aaKnown RBP7.48□□□□□ -1.21
LINC01961-201ENST00000449954 ITGAMP11215 1152 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 KRT3P12035 628 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 UGT1A1P22309 533 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 MMP8P22894 467 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 CMA1P23946 247 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 ZFP36L2P47974 494 aaKnown RBP7.48□□□□□ -1.21
LINC01961-201ENST00000449954 ZNF135P52742 658 aaPredicted RBP7.48□□□□□ -1.21
LINC01961-201ENST00000449954 NUP107P57740 925 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 OCA2Q04671 838 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 KLC1Q07866 573 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 STIM1Q13586 685 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 TUBA3CQ13748 450 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 KRTAP24-1Q3LI83 254 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 NAA35Q5VZE5 725 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 ALG1LQ6GMV1 187 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 HEPHL1Q6MZM0 1159 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 TUBA3EQ6PEY2 450 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 HIPK1Q86Z02 1210 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 FAM71AQ8IYT1 594 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 ULK2Q8IYT8 1036 aa7.48□□□□□ -1.21
LINC01961-201ENST00000449954 GPR26Q8NDV2 337 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms