RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 A8MT66 165 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 APODP05090 189 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 ASPAP45381 313 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 RELAQ04206 551 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 FAAH2Q6GMR7 532 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 PCDHB9Q9Y5E1 797 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 TLR4O00206 839 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 DFNA5O60443 496 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 C8GP07360 202 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 CD40LGP29965 261 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 ECHS1P30084 290 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 LCN1P31025 176 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 PTGER3P43115 390 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 LARS2Q15031 903 aaKnown RBP13.63□□□□□ -0.23
ITGB4-202ENST00000449880 SH3PXD2AQ5TCZ1 1133 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 TMEM198Q66K66 360 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 RHBDF2Q6PJF5 856 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 CEP76Q8TAP6 659 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 DENND1AQ8TEH3 1009 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 SNX27Q96L92 541 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 MRM3Q9HC36 420 aaKnown RBP13.63□□□□□ -0.23
ITGB4-202ENST00000449880 DTLQ9NZJ0 730 aa13.63□□□□□ -0.23
ITGB4-202ENST00000449880 TBC1D3DA0A087WVF3 549 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TBC1D3IA0A087WXS9 549 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TBC1D3EA0A087X179 549 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TBC1D3KA0A087X1G2 549 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TBC1D3FA6NER0 549 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TBC1D3LB9A6J9 549 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 PLD2O14939 933 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TBC1D3HP0C7X1 549 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 CLCN4P51793 760 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 PPP2R2BQ00005 443 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 ZNF234Q14588 700 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TBC1D3GQ6DHY5 549 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TBC1D3CQ6IPX1 549 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TBC1D3Q8IZP1 549 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 SLC28A3Q9HAS3 691 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 FNIP2Q9P278 1114 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 ZDHHC2Q9UIJ5 367 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 PCDHGB7Q9Y5F8 929 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 SPIN1Q9Y657 262 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 PRORSD1PA6NEY8 169 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 CXorf49A8MYA2 514 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 L7N2F9 121 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 FGF3P11487 239 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 HOXD12P35452 270 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 CBX2Q14781 532 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 EML3Q32P44 896 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 MPPE1Q53F39 396 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 SNAP47Q5SQN1 464 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TREML1Q86YW5 311 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 VANGL1Q8TAA9 524 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 GEMIN6Q8WXD5 167 aaKnown RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 NCSTNQ92542 709 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 DEC1Q9P2X7 70 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 RGS17Q9UGC6 210 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 ALG5Q9Y673 324 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 NAV1Q8NEY1 1877 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 KDM4BO94953 1096 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 HLA-DPB1P04440 258 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 CYP3A5P20815 502 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 CD247P20963 164 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 VARSP26640 1264 aaKnown RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 MAXP61244 160 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 EFR3AQ14156 821 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 HEPACAMQ14CZ8 416 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TSTQ16762 297 aaKnown RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 SYT16Q17RD7 645 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 RNASE12Q5GAN4 147 aaKnown RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 OR10G6Q8NH81 332 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 NR4A3Q92570 626 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 GTPBP3Q969Y2 492 aaKnown RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 BTN2A3PQ96KV6 586 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 FARSBQ9NSD9 589 aaKnown RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 MAGED1Q9Y5V3 778 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 LTBP3Q9NS15 1303 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 MYH13Q9UKX3 1938 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 FANCGO15287 622 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TP73O15350 636 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 ANXA4P09525 319 aaPredicted RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 CTPS1P17812 591 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 AQP1P29972 269 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 PPP5CP53041 499 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 PPP3R1P63098 170 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 NDUFA9Q16795 377 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 ESRP1Q6NXG1 681 aaKnown RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 QSOX2Q6ZRP7 698 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 POF1BQ8WVV4 589 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 NTAN1Q96AB6 310 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 ST14Q9Y5Y6 855 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 OR2AT4A6NND4 320 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 E7ESA3 106 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 GSTT2P0CG29 244 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 PRPS1L1P21108 318 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 ARCN1P48444 511 aaKnown RBP13.62□□□□□ -0.23
ITGB4-202ENST00000449880 HCAR3P49019 387 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 PNCKQ6P2M8 343 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 DLK2Q6UY11 383 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 LINGO2Q7L985 606 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 PHYKPLQ8IUZ5 450 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms