RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 WDR83Q9BRX9 315 aaKnown RBP12.05□□□□□ -0.48
SSR4-205ENST00000447375 ACTL8Q9H568 366 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 MVB12BQ9H7P6 319 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 LATS2Q9NRM7 1088 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 SIDT1Q9NXL6 827 aaKnown RBP12.05□□□□□ -0.48
SSR4-205ENST00000447375 ZC3H7BQ9UGR2 993 aaKnown RBP12.05□□□□□ -0.48
SSR4-205ENST00000447375 CRYL1Q9Y2S2 319 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 UTP11Q9Y3A2 253 aaKnown RBP12.05□□□□□ -0.48
SSR4-205ENST00000447375 MRFAP1Q9Y605 127 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 SPTBP11277 2137 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 MN1Q10571 1320 aaPredicted RBP12.05□□□□□ -0.48
SSR4-205ENST00000447375 A0A1B0GTL3 188 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 UBA6A0AVT1 1052 aaPredicted RBP12.04□□□□□ -0.48
SSR4-205ENST00000447375 PRSS44E7EML9 344 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 DIAPH2O60879 1101 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 APOA4P06727 396 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 ERVK-10P10266 1014 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 PKMP14618 531 aaKnown RBP12.04□□□□□ -0.48
SSR4-205ENST00000447375 CAPZBP47756 277 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 EIF3BP55884 814 aaKnown RBP12.04□□□□□ -0.48
SSR4-205ENST00000447375 ITGA1P56199 1179 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 PER3P56645 1201 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 HSPA14Q0VDF9 509 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 CALCOCO2Q13137 446 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 BOP1Q14137 746 aaKnown RBP12.04□□□□□ -0.48
SSR4-205ENST00000447375 FRG1Q14331 258 aaKnown RBP12.04□□□□□ -0.48
SSR4-205ENST00000447375 ZRSR2Q15696 482 aaKnown RBP12.04□□□□□ -0.48
SSR4-205ENST00000447375 SYTL3Q4VX76 610 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 ZNF789Q5FWF6 425 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 HP1BP3Q5SSJ5 553 aaPredicted RBP12.04□□□□□ -0.48
SSR4-205ENST00000447375 STEAP4Q687X5 459 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 KLHL35Q6PF15 583 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 UNC5AQ6ZN44 842 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 KCNMB4Q86W47 210 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 VRK3Q8IV63 474 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 ACVR1CQ8NER5 493 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 RSC1A1Q92681 617 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 ZDHHC12Q96GR4 267 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 ELMO2Q96JJ3 720 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 FAM167BQ9BTA0 163 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 LRRC1Q9BTT6 524 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 RAB17Q9H0T7 212 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 DPH5Q9H2P9 285 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 TFB2MQ9H5Q4 396 aaKnown RBP12.04□□□□□ -0.48
SSR4-205ENST00000447375 LHX9Q9NQ69 397 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 LNPEPQ9UIQ6 1025 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 FBXO5Q9UKT4 447 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 HIVEP1P15822 2718 aa12.04□□□□□ -0.48
SSR4-205ENST00000447375 PRRC2CQ9Y520 2896 aaKnown RBP12.04□□□□□ -0.48
SSR4-205ENST00000447375 C21orf140B9A014 251 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 EIF3HO15372 352 aaKnown RBP eCLIP12.03□□□□□ -0.48
SSR4-205ENST00000447375 TOX3O15405 576 aaPredicted RBP12.03□□□□□ -0.48
SSR4-205ENST00000447375 LRRTM2O43300 516 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 CEACAM4O75871 244 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 HAUS5O94927 633 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 MT-ND3P03897 115 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 ANKRD34CP0C6C1 535 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 SLC1A2P43004 574 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 CSE1LP55060 971 aaKnown RBP12.03□□□□□ -0.48
SSR4-205ENST00000447375 GFERP55789 205 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 CAV1Q03135 178 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 PDIA2Q13087 525 aaKnown RBP12.03□□□□□ -0.48
SSR4-205ENST00000447375 IL11RAQ14626 422 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 PLCL1Q15111 1095 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 TRADDQ15628 312 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 PLEKHN1Q494U1 663 aaPredicted RBP12.03□□□□□ -0.48
SSR4-205ENST00000447375 PLEKHS1Q5SXH7 462 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 ZNF549Q6P9A3 640 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 OTOAQ7RTW8 1153 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 CNTN4Q8IWV2 1026 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 TBC1D21Q8IYX1 336 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 IQCKQ8N0W5 287 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 MMGT1Q8N4V1 131 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 C2CD4AQ8NCU7 369 aaPredicted RBP12.03□□□□□ -0.48
SSR4-205ENST00000447375 MNS1Q8NEH6 495 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 LCN9Q8WX39 176 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 CERS2Q96G23 380 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 C9orf72Q96LT7 481 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 TGM7Q96PF1 710 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 OR6C1Q96RD1 312 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 FBXO6Q9NRD1 293 aaPredicted RBP12.03□□□□□ -0.48
SSR4-205ENST00000447375 IARS2Q9NSE4 1012 aaKnown RBP12.03□□□□□ -0.48
SSR4-205ENST00000447375 HRASLS2Q9NWW9 162 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 SEMA5BQ9P283 1151 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 KLHL42Q9P2K6 505 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 G3BP2Q9UN86 482 aaKnown RBP12.03□□□□□ -0.48
SSR4-205ENST00000447375 CHMP2BQ9UQN3 213 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 MED16Q9Y2X0 877 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 COMMD10Q9Y6G5 202 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 CROCCQ5TZA2 2017 aa12.03□□□□□ -0.48
SSR4-205ENST00000447375 OR5K3A6NET4 321 aa12.02□□□□□ -0.49
SSR4-205ENST00000447375 NIPSNAP2O75323 286 aa12.02□□□□□ -0.49
SSR4-205ENST00000447375 SPAG6O75602 509 aa12.02□□□□□ -0.49
SSR4-205ENST00000447375 TPBGLP0DKB5 382 aa12.02□□□□□ -0.49
SSR4-205ENST00000447375 CHRM3P20309 590 aa12.02□□□□□ -0.49
SSR4-205ENST00000447375 ITGA3P26006 1051 aa12.02□□□□□ -0.49
SSR4-205ENST00000447375 SH3BP2P78314 561 aa12.02□□□□□ -0.49
SSR4-205ENST00000447375 PRKG2Q13237 762 aa12.02□□□□□ -0.49
SSR4-205ENST00000447375 GBX1Q14549 363 aa12.02□□□□□ -0.49
SSR4-205ENST00000447375 FASTKD3Q14CZ7 662 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms