RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 ZRSR2Q15696 482 aaKnown RBP11.84□□□□□ -0.51
LTBR-204ENST00000444814 CYP2A13Q16696 494 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 MANEAQ5SRI9 462 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 RBM20Q5T481 1227 aaKnown RBP11.84□□□□□ -0.51
LTBR-204ENST00000444814 LGSNQ5TDP6 509 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 THEMIS2Q5TEJ8 643 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 PAQR3Q6TCH7 311 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 DNAJC14Q6Y2X3 702 aaPredicted RBP11.84□□□□□ -0.51
LTBR-204ENST00000444814 FRA10AC1Q70Z53 315 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 NLGN4XQ8N0W4 816 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 IL22RA1Q8N6P7 574 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 NLGN4YQ8NFZ3 816 aaPredicted RBP11.84□□□□□ -0.51
LTBR-204ENST00000444814 FBF1Q8TES7 1133 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 ZUFSPQ96AP4 578 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 PDLIM5Q96HC4 596 aaKnown RBP11.84□□□□□ -0.51
LTBR-204ENST00000444814 OR2A14Q96R47 310 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 RBBP8Q99708 897 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 CCDC77Q9BR77 488 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 SLC12A9Q9BXP2 914 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 ULBP3Q9BZM4 244 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 GPAMQ9HCL2 828 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 IRAK4Q9NWZ3 460 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 PLAGL1Q9UM63 463 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 B3GALT1Q9Y5Z6 326 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 NFS1Q9Y697 457 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 AP1M2Q9Y6Q5 423 aa11.84□□□□□ -0.51
LTBR-204ENST00000444814 A0A087WUV0 522 aaPredicted RBP11.83□□□□□ -0.52
LTBR-204ENST00000444814 ARHGEF33A8MVX0 844 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 TARM1B6A8C7 271 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 C9orf172C9J069 976 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 KLK3P07288 261 aaPredicted RBP11.83□□□□□ -0.52
LTBR-204ENST00000444814 INHBAP08476 426 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 RHOXF2BP0C7M4 288 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 GABRB3P28472 473 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 CRABP2P29373 138 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 SERPINB9P50453 376 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 CDKN2DP55273 166 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 TSTA3Q13630 321 aaPredicted RBP11.83□□□□□ -0.52
LTBR-204ENST00000444814 KBTBD12Q3ZCT8 623 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 TRMT10CQ7L0Y3 403 aaKnown RBP11.83□□□□□ -0.52
LTBR-204ENST00000444814 ADAMTSL2Q86TH1 951 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 TMEM126BQ8IUX1 230 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 TBC1D19Q8N5T2 526 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 GIMAP7Q8NHV1 300 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 EEF1AKMT1Q8WVE0 214 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 TRAPPC9Q96Q05 1148 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 C17orf62Q9BQA9 187 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 RHOXF2Q9BQY4 288 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 PLAC1Q9HBJ0 212 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 RRAGDQ9NQL2 400 aaPredicted RBP11.83□□□□□ -0.52
LTBR-204ENST00000444814 CCDC177Q9NQR7 707 aaPredicted RBP11.83□□□□□ -0.52
LTBR-204ENST00000444814 NOVA2Q9UNW9 492 aaKnown RBP11.83□□□□□ -0.52
LTBR-204ENST00000444814 PLCL2Q9UPR0 1127 aa11.83□□□□□ -0.52
LTBR-204ENST00000444814 PIKFYVEQ9Y2I7 2098 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 A0A1W2PNU3 283 aaPredicted RBP11.82□□□□□ -0.52
LTBR-204ENST00000444814 E7EQ34 232 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 TLX3O43711 291 aaPredicted RBP11.82□□□□□ -0.52
LTBR-204ENST00000444814 RAD1O60671 282 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 CPNE3O75131 537 aaKnown RBP11.82□□□□□ -0.52
LTBR-204ENST00000444814 STK17BO94768 372 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 CD63P08962 238 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 EBLN1P0CF75 366 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 ZNF37AP17032 561 aaPredicted RBP11.82□□□□□ -0.52
LTBR-204ENST00000444814 CNTFP26441 200 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 ITGA1P56199 1179 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 ATP6V0D1P61421 351 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 PPP1CAP62136 330 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 TAF1BQ53T94 588 aaPredicted RBP11.82□□□□□ -0.52
LTBR-204ENST00000444814 TEX35Q5T0J7 233 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 TLDC1Q6P9B6 456 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 C6orf15Q6UXA7 325 aaPredicted RBP11.82□□□□□ -0.52
LTBR-204ENST00000444814 RAPH1Q70E73 1250 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 PIWIL4Q7Z3Z4 852 aaKnown RBP11.82□□□□□ -0.52
LTBR-204ENST00000444814 SPACA3Q8IXA5 215 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 CACNA2D3Q8IZS8 1091 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 LMNTD1Q8N9Z9 388 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 DLG3Q92796 817 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 NAF1Q96HR8 494 aaKnown RBP11.82□□□□□ -0.52
LTBR-204ENST00000444814 CCNL2Q96S94 520 aaPredicted RBP11.82□□□□□ -0.52
LTBR-204ENST00000444814 PKP4Q99569 1192 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 GPR22Q99680 433 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 CTRCQ99895 268 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 ACSS3Q9H6R3 686 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 MRPS30Q9NP92 439 aaKnown RBP11.82□□□□□ -0.52
LTBR-204ENST00000444814 ARL15Q9NXU5 204 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 GALPQ9UBC7 116 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 CTNNAL1Q9UBT7 734 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 TLK1Q9UKI8 766 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 SRPK3Q9UPE1 567 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 MED16Q9Y2X0 877 aa11.82□□□□□ -0.52
LTBR-204ENST00000444814 TMEM184BQ9Y519 407 aaPredicted RBP11.82□□□□□ -0.52
LTBR-204ENST00000444814 TMEM150CB9EJG8 249 aa11.81□□□□□ -0.52
LTBR-204ENST00000444814 SCRG1O75711 98 aa11.81□□□□□ -0.52
LTBR-204ENST00000444814 KRT38O76015 456 aa11.81□□□□□ -0.52
LTBR-204ENST00000444814 S100BP04271 92 aaPredicted RBP11.81□□□□□ -0.52
LTBR-204ENST00000444814 ERGP11308 486 aa11.81□□□□□ -0.52
LTBR-204ENST00000444814 FOLR1P15328 257 aa11.81□□□□□ -0.52
LTBR-204ENST00000444814 ST6GAL1P15907 406 aa11.81□□□□□ -0.52
LTBR-204ENST00000444814 SLC26A3P40879 764 aa11.81□□□□□ -0.52
LTBR-204ENST00000444814 GPX6P59796 221 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms