RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 CXCL16Q9H2A7 254 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 TRABDQ9H4I3 376 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 C10orf88Q9H8K7 445 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 NOD2Q9HC29 1040 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 PAPOLBQ9NRJ5 636 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 DECR2Q9NUI1 292 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM49BQ9NUQ9 324 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 GDAP2Q9NXN4 497 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 PSMC3IPQ9P2W1 217 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CTNNAL1Q9UBT7 734 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 TUBGCP4Q9UGJ1 667 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 HSF4Q9ULV5 492 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 PIN4Q9Y237 131 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 TTLL3Q9Y4R7 772 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 HES2Q9Y543 173 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CACNA1IQ9P0X4 2223 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 PTPRFP10586 1907 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 IQANK1A0A1B0GTG1 560 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 A0A1W2PPM1 405 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 TCRBV7S3A2A0A539 114 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CD8B2A6NJW9 211 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC38A8A6NNN8 435 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 M0QZ92 97 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 DNM1LO00429 736 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CYB561D2O14569 222 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 TRDMT1O14717 391 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 XPO1O14980 1071 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 KCNN4O15554 427 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 PRPF4O43172 522 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SNX3O60493 162 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 DOK2O60496 412 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 TSPAN3O60637 253 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 ATP2C2O75185 946 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SPAG7O75391 227 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 BANF1O75531 89 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 DAB1O75553 588 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SPAG6O75602 509 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CER1O95813 267 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 PLAUP00749 431 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 OAS1P00973 400 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 GSTA1P08263 222 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 GSTA2P09210 222 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 PSG1P11464 419 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCDC130P13994 396 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 TAC1P20366 129 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CYP2B6P20813 491 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CA4P22748 312 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CYP2F1P24903 491 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 LMO2P25791 158 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SSTR1P30872 391 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCKARP32238 428 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCKBRP32239 447 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 FOXN2P32314 431 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 ELK3P41970 407 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 MATKP42679 507 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 PSMC4P43686 418 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SULT1E1P49888 294 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 HDAC4P56524 1084 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 HUNKP57058 714 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 YWHAGP61981 247 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 YPEL5P62699 121 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 YWHAZP63104 245 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 BEX3Q00994 111 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 GAD2Q05329 585 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SF3A3Q12874 501 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 DNASE1L3Q13609 305 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SEMA3AQ14563 771 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 KCNJ11Q14654 390 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 DPYSL2Q16555 572 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 BAK1Q16611 211 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CA9Q16790 459 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 PRICKLE4Q2TBC4 344 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CTXN3Q4LDR2 81 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 AWAT1Q58HT5 328 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 PPP6R3Q5H9R7 873 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 GLRA4Q5JXX5 417 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 MANEAQ5SRI9 462 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 LGSNQ5TDP6 509 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 HHATQ5VTY9 493 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 KIAA1161Q6NSJ0 714 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 TRNP1Q6NT89 227 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 RGS9BPQ6ZS82 235 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CYP4V2Q6ZWL3 525 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 H1FNTQ75WM6 255 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 BZW1Q7L1Q6 419 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC26A9Q7LBE3 791 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 STRADAQ7RTN6 431 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 TRPM8Q7Z2W7 1104 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 SPATA21Q7Z572 469 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 PSTKQ8IV42 348 aaKnown RBP3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 HACE1Q8IYU2 909 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 ADGRF2Q8IZF7 708 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 DEFB106AQ8N104 65 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 MMP21Q8N119 569 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 CNPY4Q8N129 248 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 PLD5Q8N7P1 536 aa3.43□□□□□ -1.86
HMGB3P11-201ENST00000440127 GBP7Q8N8V2 638 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms