RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 TSTA3Q13630 321 aaPredicted RBP19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 SLC9A5Q14940 896 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 ZC3H12BQ5HYM0 836 aaKnown RBP19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 FAM69BQ5VUD6 431 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 RHBDD2Q6NTF9 364 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 TCTN3Q6NUS6 607 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 PPIL6Q8IXY8 311 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 TEX19Q8NA77 164 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 SLC25A23Q9BV35 468 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 TRIM55Q9BYV6 548 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 ING2Q9H160 280 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 EPN3Q9H201 632 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 FAM114A2Q9NRY5 505 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 EURLQ9NYK6 297 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 DHCR7Q9UBM7 475 aaKnown RBP19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 FAM169AQ9Y6X4 670 aa19.1■□□□□ 0.65
SHROOM1-204ENST00000440118 MED13Q9UHV7 2174 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 ZNF185O15231 689 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 HCRTR1O43613 425 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 USP1O94782 785 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 FKBP9O95302 570 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 CBSLP0DN79 551 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 ALAS2P22557 587 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 CBSP35520 551 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 CASRP41180 1078 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 FOLR3P41439 243 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 CCL11P51671 97 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 ADARP55265 1226 aaKnown RBP19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 DCDP81605 110 aaKnown RBP19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 GRB7Q14451 532 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 LONRF1Q17RB8 773 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 MCATQ8IVS2 390 aaKnown RBP19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 DNAJC22Q8N4W6 341 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 GABPB2Q8TAK5 448 aaPredicted RBP19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 CALML6Q8TD86 181 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 DENND1AQ8TEH3 1009 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 MIPEPQ99797 713 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 MENTQ9BUN1 341 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 FBXO6Q9NRD1 293 aaPredicted RBP19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 SPATA7Q9P0W8 599 aa19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 ASH1LQ9NR48 2969 aaKnown RBP19.09■□□□□ 0.65
SHROOM1-204ENST00000440118 KRT87PA6NCN2 255 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 CES2O00748 559 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 CATP04040 527 aaKnown RBP19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 CD63P08962 238 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 TCP1P17987 556 aaKnown RBP19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 PSMB5P28074 263 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 GRIA3P42263 894 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 SLC1A2P43004 574 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 GABRA4P48169 554 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 RRADP55042 308 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 CTBP1Q13363 440 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 CCSMST1Q4G0I0 132 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 FIGLAQ6QHK4 219 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 CENPUQ71F23 418 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 DENND6AQ8IWF6 608 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 TTC29Q8NA56 475 aaPredicted RBP19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 SELENOSQ9BQE4 189 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 FAM167BQ9BTA0 163 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 DDX47Q9H0S4 455 aaKnown RBP19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 KCNF1Q9H3M0 494 aa19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 PTRH2Q9Y3E5 179 aaKnown RBP19.08■□□□□ 0.64
SHROOM1-204ENST00000440118 NBASA2RRP1 2371 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 CTSBP07858 339 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 F7P08709 466 aaPredicted RBP19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 ARSFP54793 590 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 NAA25Q14CX7 972 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 KLHL38Q2WGJ6 581 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 ACSBG2Q5FVE4 666 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 COLEC12Q5KU26 742 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 TTLL10Q6ZVT0 673 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 LMNTD2Q8IXW0 634 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 NAT8LQ8N9F0 302 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 CAPZA3Q96KX2 299 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 GBP5Q96PP8 586 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 NEU2Q9Y3R4 380 aa19.07■□□□□ 0.64
SHROOM1-204ENST00000440118 ANKRD12Q6UB98 2062 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 A0A1B0GX78 115 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 ZNF839A8K0R7 811 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 PEX12O00623 359 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 SYF2O95926 243 aaKnown RBP19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 CAPN1P07384 714 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 PGAM1P18669 254 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 CMPK1P30085 196 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 RPA3P35244 121 aaPredicted RBP19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 CUL1Q13616 776 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 ATP1A4Q13733 1029 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 GRM7Q14831 915 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 NKAIN1Q4KMZ8 207 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 TCTE1Q5JU00 501 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 ZNF385CQ66K41 422 aaPredicted RBP19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 PCGF5Q86SE9 256 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 KCNMB4Q86W47 210 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 TMEM102Q8N9M5 508 aaPredicted RBP19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 OR2L3Q8NG85 312 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 OR9A1PQ8NGU1 263 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 ADAMTS17Q8TE56 1095 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 ZUFSPQ96AP4 578 aa19.06■□□□□ 0.64
SHROOM1-204ENST00000440118 ACAT2Q9BWD1 397 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms