RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 PAIP1Q9H074 479 aaKnown RBP12.34□□□□□ -0.43
HCG18-236ENST00000438412 PFDN4Q9NQP4 134 aa12.34□□□□□ -0.43
HCG18-236ENST00000438412 GULP1Q9UBP9 304 aa12.34□□□□□ -0.43
HCG18-236ENST00000438412 INVSQ9Y283 1065 aa12.34□□□□□ -0.43
HCG18-236ENST00000438412 BTBD3Q9Y2F9 522 aa12.34□□□□□ -0.43
HCG18-236ENST00000438412 PCYT1BQ9Y5K3 369 aaPredicted RBP12.34□□□□□ -0.43
HCG18-236ENST00000438412 NUMA1Q14980 2115 aa12.34□□□□□ -0.43
HCG18-236ENST00000438412 SMIM31A0A1B0GVY4 71 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 SLC28A1O00337 649 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 KPNA3O00505 521 aaPredicted RBP12.33□□□□□ -0.43
HCG18-236ENST00000438412 GSTA4O15217 222 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 CLOCKO15516 846 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 ANXA6P08133 673 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 HIST1H2AGP0C0S8 130 aaPredicted RBP12.33□□□□□ -0.43
HCG18-236ENST00000438412 HIST1H2ADP20671 130 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 SHMT2P34897 504 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 SLC6A11P48066 632 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 CLCN2P51788 898 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 PCM1Q15154 2024 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 FXNQ16595 210 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 C1orf53Q5VUE5 145 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 PARS2Q7L3T8 475 aaKnown RBP12.33□□□□□ -0.43
HCG18-236ENST00000438412 ZBTB46Q86UZ6 589 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 CLECL1Q8IZS7 167 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 C2orf73Q8N5S3 287 aaPredicted RBP12.33□□□□□ -0.43
HCG18-236ENST00000438412 HIST1H2AHQ96KK5 128 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 ZBTB18Q99592 522 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 BARD1Q99728 777 aaKnown RBP12.33□□□□□ -0.43
HCG18-236ENST00000438412 HIST1H2AJQ99878 128 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 HEPHQ9BQS7 1158 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 H2AFJQ9BTM1 129 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 C9orf16Q9BUW7 83 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 CERS4Q9HA82 394 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 SMPD3Q9NY59 655 aaPredicted RBP12.33□□□□□ -0.43
HCG18-236ENST00000438412 AASSQ9UDR5 926 aa12.33□□□□□ -0.43
HCG18-236ENST00000438412 PLXNA2O75051 1894 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 C16orf96A6NNT2 1141 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 NUAK1O60285 661 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 SLC16A8O95907 504 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 CDH2P19022 906 aaPredicted RBP12.33□□□□□ -0.44
HCG18-236ENST00000438412 MSH3P20585 1137 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 PTPN6P29350 595 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 POLR2IP36954 125 aaKnown RBP12.33□□□□□ -0.44
HCG18-236ENST00000438412 PIGAP37287 484 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 MEF2AQ02078 507 aaPredicted RBP12.33□□□□□ -0.44
HCG18-236ENST00000438412 NAE1Q13564 534 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 GBX1Q14549 363 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 ACOX1Q15067 660 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 TMTC4Q5T4D3 741 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 FAM180BQ6P0A1 224 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 MFSD2AQ8NA29 543 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 GPR156Q8NFN8 814 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 VN1R2Q8NFZ6 395 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 FAM162AQ96A26 154 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 ZNF641Q96N77 438 aaPredicted RBP12.33□□□□□ -0.44
HCG18-236ENST00000438412 MUS81Q96NY9 551 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 PKD2L2Q9NZM6 624 aa12.33□□□□□ -0.44
HCG18-236ENST00000438412 GRXCR1A8MXD5 290 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 PRRT4C9JH25 899 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 GFYI3L273 518 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 SAP18O00422 153 aaKnown RBP12.32□□□□□ -0.44
HCG18-236ENST00000438412 CXCR6O00574 342 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 FOXD2O60548 495 aaPredicted RBP12.32□□□□□ -0.44
HCG18-236ENST00000438412 KRT6AP02538 564 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 KRT6BP04259 564 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 CDH1P12830 882 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 VIPR1P32241 457 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 KRT6CP48668 564 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 NAA20P61599 178 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 PIGFQ07326 219 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 LSAMPQ13449 338 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 COL9A2Q14055 689 aaPredicted RBP12.32□□□□□ -0.44
HCG18-236ENST00000438412 XKR6Q5GH73 641 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 HENMT1Q5T8I9 393 aaKnown RBP12.32□□□□□ -0.44
HCG18-236ENST00000438412 ELMSAN1Q6PJG2 1045 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 TBC1D21Q8IYX1 336 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 PAPD5Q8NDF8 572 aaKnown RBP12.32□□□□□ -0.44
HCG18-236ENST00000438412 CLP1Q92989 425 aaKnown RBP12.32□□□□□ -0.44
HCG18-236ENST00000438412 KAT8Q9H7Z6 458 aaKnown RBP12.32□□□□□ -0.44
HCG18-236ENST00000438412 VNN3Q9NY84 501 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 EBF1Q9UH73 591 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 MAGEL2Q9UJ55 1249 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 CDC14AQ9UNH5 594 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 PCDHGA11Q9Y5H2 935 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 TRBV5-3A0A0A0MS03 114 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 H0YJX3 145 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 SPINT1O43278 529 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 PRSS23O95084 383 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 SERPINA1P01009 418 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 IL7RP16871 459 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 PTPN2P17706 415 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 MYF6P23409 242 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 NR1H2P55055 460 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 HTRA4P83105 476 aaPredicted RBP12.32□□□□□ -0.44
HCG18-236ENST00000438412 AASDHQ4L235 1098 aaPredicted RBP12.32□□□□□ -0.44
HCG18-236ENST00000438412 RUNDC3AQ59EK9 446 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 FRG2Q64ET8 278 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 DOK6Q6PKX4 331 aa12.32□□□□□ -0.44
HCG18-236ENST00000438412 RAVER1Q8IY67 606 aaKnown RBP12.32□□□□□ -0.44
HCG18-236ENST00000438412 SPPL3Q8TCT6 385 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms