RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 IRF8Q02556 426 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 LIPEQ05469 1076 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 RABL3Q5HYI8 236 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 PIP5KL1Q5T9C9 394 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 PRAMEF9Q5VWM5 478 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 OR56A3Q8NH54 315 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 SLC13A3Q8WWT9 602 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 CLMPQ9H6B4 373 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 INTS7Q9NVH2 962 aaKnown RBP24.98■■□□□ 1.59
CPNE1-216ENST00000437340 ARMC1Q9NVT9 282 aa24.98■■□□□ 1.59
CPNE1-216ENST00000437340 GMPR2Q9P2T1 348 aaKnown RBP24.98■■□□□ 1.59
CPNE1-216ENST00000437340 NPC1O15118 1278 aa24.97■■□□□ 1.59
CPNE1-216ENST00000437340 BCKDHAP12694 445 aa24.97■■□□□ 1.59
CPNE1-216ENST00000437340 PDHA2P29803 388 aa24.97■■□□□ 1.59
CPNE1-216ENST00000437340 PBLDP30039 288 aaPredicted RBP24.97■■□□□ 1.59
CPNE1-216ENST00000437340 GRIA3P42263 894 aa24.97■■□□□ 1.59
CPNE1-216ENST00000437340 YBX1P67809 324 aaKnown RBP24.97■■□□□ 1.59
CPNE1-216ENST00000437340 ITPRIPL2Q3MIP1 535 aa24.97■■□□□ 1.59
CPNE1-216ENST00000437340 SUSD1Q6UWL2 747 aa24.97■■□□□ 1.59
CPNE1-216ENST00000437340 TRIM74Q86UV6 250 aa24.97■■□□□ 1.59
CPNE1-216ENST00000437340 SLCO4A1Q96BD0 722 aa24.97■■□□□ 1.59
CPNE1-216ENST00000437340 PKP4Q99569 1192 aa24.97■■□□□ 1.59
CPNE1-216ENST00000437340 KCTD14Q9BQ13 255 aaPredicted RBP24.97■■□□□ 1.59
CPNE1-216ENST00000437340 KXD1Q9BQD3 176 aa24.97■■□□□ 1.59
CPNE1-216ENST00000437340 ATXN10Q9UBB4 475 aa24.97■■□□□ 1.59
CPNE1-216ENST00000437340 CNOT11Q9UKZ1 510 aaKnown RBP24.97■■□□□ 1.59
CPNE1-216ENST00000437340 KRT87PA6NCN2 255 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 AP1G1O43747 822 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 C1orf105O95561 183 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 UQCRBP14927 111 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 IMPA1P29218 277 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 HNF4AP41235 474 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 BDKRB1P46663 353 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 CSTF3Q12996 717 aaKnown RBP24.96■■□□□ 1.59
CPNE1-216ENST00000437340 NAE1Q13564 534 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 INPP5AQ14642 412 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 FXNQ16595 210 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 AASDHQ4L235 1098 aaPredicted RBP24.96■■□□□ 1.59
CPNE1-216ENST00000437340 PARM1Q6UWI2 310 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 ADAMTSL4Q6UY14 1074 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 CFAP206Q8IYR0 622 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 HIC2Q96JB3 615 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 GAS2L1Q99501 681 aaPredicted RBP24.96■■□□□ 1.59
CPNE1-216ENST00000437340 CGREF1Q99674 301 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 SNX13Q9Y5W8 968 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 STON1Q9Y6Q2 735 aa24.96■■□□□ 1.59
CPNE1-216ENST00000437340 HTR1EP28566 365 aa24.95■■□□□ 1.59
CPNE1-216ENST00000437340 GDI1P31150 447 aa24.95■■□□□ 1.59
CPNE1-216ENST00000437340 DGKQP52824 942 aa24.95■■□□□ 1.59
CPNE1-216ENST00000437340 CLDN8P56748 225 aa24.95■■□□□ 1.59
CPNE1-216ENST00000437340 RPS14P62263 151 aaKnown RBP24.95■■□□□ 1.59
CPNE1-216ENST00000437340 OR8J3Q8NGG0 315 aa24.95■■□□□ 1.59
CPNE1-216ENST00000437340 DNAJB8Q8NHS0 232 aa24.95■■□□□ 1.59
CPNE1-216ENST00000437340 FGF14Q92915 247 aa24.95■■□□□ 1.59
CPNE1-216ENST00000437340 RSPH9Q9H1X1 276 aaPredicted RBP24.95■■□□□ 1.59
CPNE1-216ENST00000437340 DPEP2Q9H4A9 486 aa24.95■■□□□ 1.59
CPNE1-216ENST00000437340 CCM2LQ9NUG4 571 aaPredicted RBP24.95■■□□□ 1.59
CPNE1-216ENST00000437340 GPRC5BQ9NZH0 403 aa24.95■■□□□ 1.59
CPNE1-216ENST00000437340 ZFC3H1O60293 1989 aaKnown RBP24.95■■□□□ 1.58
CPNE1-216ENST00000437340 ARPC2O15144 300 aa24.95■■□□□ 1.58
CPNE1-216ENST00000437340 KCNH1O95259 989 aa24.95■■□□□ 1.58
CPNE1-216ENST00000437340 SLC16A8O95907 504 aa24.95■■□□□ 1.58
CPNE1-216ENST00000437340 NEK2P51955 445 aa24.95■■□□□ 1.58
CPNE1-216ENST00000437340 FAM174BQ3ZCQ3 159 aa24.95■■□□□ 1.58
CPNE1-216ENST00000437340 CCSMST1Q4G0I0 132 aa24.95■■□□□ 1.58
CPNE1-216ENST00000437340 XKR6Q5GH73 641 aa24.95■■□□□ 1.58
CPNE1-216ENST00000437340 GRHL2Q6ISB3 625 aa24.95■■□□□ 1.58
CPNE1-216ENST00000437340 OR2L2Q8NH16 312 aa24.95■■□□□ 1.58
CPNE1-216ENST00000437340 GATA6Q92908 595 aa24.95■■□□□ 1.58
CPNE1-216ENST00000437340 COX14Q96I36 57 aa24.95■■□□□ 1.58
CPNE1-216ENST00000437340 H0YIV9 168 aa24.94■■□□□ 1.58
CPNE1-216ENST00000437340 H3BQ06 376 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-216ENST00000437340 CLGNO14967 610 aa24.94■■□□□ 1.58
CPNE1-216ENST00000437340 RNASEH1O60930 286 aaKnown RBP24.94■■□□□ 1.58
CPNE1-216ENST00000437340 PGRP06401 933 aa24.94■■□□□ 1.58
CPNE1-216ENST00000437340 ZNF8P17098 575 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-216ENST00000437340 DRD3P35462 400 aa24.94■■□□□ 1.58
CPNE1-216ENST00000437340 ZNF547Q8IVP9 402 aa24.94■■□□□ 1.58
CPNE1-216ENST00000437340 HM13Q8TCT9 377 aa24.94■■□□□ 1.58
CPNE1-216ENST00000437340 GTF2H4Q92759 462 aa24.94■■□□□ 1.58
CPNE1-216ENST00000437340 METTL2AQ96IZ6 378 aaKnown RBP24.94■■□□□ 1.58
CPNE1-216ENST00000437340 TRMT61BQ9BVS5 477 aaKnown RBP24.94■■□□□ 1.58
CPNE1-216ENST00000437340 VCXQ9H320 206 aa24.94■■□□□ 1.58
CPNE1-216ENST00000437340 ZDHHC4Q9NPG8 344 aa24.94■■□□□ 1.58
CPNE1-216ENST00000437340 EGFL7Q9UHF1 273 aa24.94■■□□□ 1.58
CPNE1-216ENST00000437340 CD207Q9UJ71 328 aa24.94■■□□□ 1.58
CPNE1-216ENST00000437340 MAGEA13PA6NCF6 341 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 POP7O75817 140 aaKnown RBP24.93■■□□□ 1.58
CPNE1-216ENST00000437340 ADH1BP00325 375 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 HSD3B1P14060 373 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 HSD3B2P26439 372 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 CAMK2GQ13555 558 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-216ENST00000437340 E2F2Q14209 437 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 CST6Q15828 149 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 MAPKAPK3Q16644 382 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 AAK1Q2M2I8 961 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 WDR20Q8TBZ3 569 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 FOXJ1Q92949 421 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 MED8Q96G25 268 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 FCRL1Q96LA6 429 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms