RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 QSOX1O00391 747 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 SUN1O94901 812 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 GSTM1P09488 218 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 VSX2P58304 361 aaPredicted RBP13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 GSTM4Q03013 218 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 FASTKQ14296 549 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 MYBPC3Q14896 1274 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 FRMPD2BQ6IN97 320 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 TLDC1Q6P9B6 456 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 FIGLAQ6QHK4 219 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 COX15Q7KZN9 410 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 CUZD1Q86UP6 607 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 CCDC89Q8N998 374 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 PPHLN1Q8NEY8 458 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 PROKR1Q8TCW9 393 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 TRIM56Q9BRZ2 755 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 SLC6A20Q9NP91 592 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 IL1RAPL1Q9NZN1 696 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 ERRFI1Q9UJM3 462 aaPredicted RBP13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 ANAPC5Q9UJX4 755 aa13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 SPTBN1Q01082 2364 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-205ENST00000431889 A0A0J9YVX5 310 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 CD3EAPO15446 510 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 CTSVO60911 334 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 GPC4O75487 556 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 EIF2S1P05198 315 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 APOA4P06727 396 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 AOAHP28039 575 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 FDFT1P37268 417 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 KCNJ1P48048 391 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 EIF3BP55884 814 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 BASP1P80723 227 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 SRSF11Q05519 484 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 DNAJC21Q5F1R6 531 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 LYPLAL1Q5VWZ2 237 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 ASZ1Q8WWH4 475 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 TTC1Q99614 292 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 ACAT2Q9BWD1 397 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 CUTCQ9NTM9 273 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 ABCF3Q9NUQ8 709 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 GALPQ9UBC7 116 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 LOC105369274A0A096LPK9 316 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 LOC102723532A0A0G2JNH3 316 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 A0A1B0GX78 115 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 TCRBV7S3A2A0A539 114 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 CLDN1O95832 211 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 MGAT1P26572 445 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 FMO4P31512 558 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 STIP1P31948 543 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 ACVR1Q04771 509 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 TSTA3Q13630 321 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 TRIP13Q15645 432 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 NKG7Q16617 165 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 DCUN1D3Q8IWE4 304 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 IQCKQ8N0W5 287 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 OR4N4Q8N0Y3 316 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 C8orf44Q96CB5 159 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 CNDP1Q96KN2 507 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 SELENOSQ9BQE4 189 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 CARD6Q9BX69 1037 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 SYNPO2LQ9H987 977 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 ATP13A2Q9NQ11 1180 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 SYBUQ9NX95 663 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 ZC3H7BQ9UGR2 993 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 SRPK3Q9UPE1 567 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 PCDHGB7Q9Y5F8 929 aa13.66□□□□□ -0.22
SMARCE1-205ENST00000431889 HIVEP3Q5T1R4 2406 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 CELSR2Q9HCU4 2923 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 AGPSO00116 658 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 SOCS6O14544 535 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 PRMT5O14744 637 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 RASGRF2O14827 1237 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 NIPSNAP2O75323 286 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 CBX6O95503 412 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 C1orf105O95561 183 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 STATHP02808 62 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 VPS41P49754 854 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 SIX1Q15475 284 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 CTSL3PQ5NE16 218 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 WASHC2DQ5SRD0 308 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 LINC00696Q6ZRV3 163 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 OVCH1Q7RTY7 1134 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 OR2L8Q8NGY9 312 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 DENND1AQ8TEH3 1009 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 MFSD3Q96ES6 412 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 SPSB2Q99619 263 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 C17orf62Q9BQA9 187 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 SLC29A3Q9BZD2 475 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 P2RY12Q9H244 342 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 CRYL1Q9Y2S2 319 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 HS3ST3B1Q9Y662 390 aa13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 COPG1Q9Y678 874 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-205ENST00000431889 PCM1Q15154 2024 aa13.64□□□□□ -0.23
SMARCE1-205ENST00000431889 CACNA1DQ01668 2161 aa13.64□□□□□ -0.23
SMARCE1-205ENST00000431889 ERI2A8K979 691 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-205ENST00000431889 DSCR3O14972 297 aa13.64□□□□□ -0.23
SMARCE1-205ENST00000431889 AVILO75366 819 aa13.64□□□□□ -0.23
SMARCE1-205ENST00000431889 NDUFS3O75489 264 aa13.64□□□□□ -0.23
SMARCE1-205ENST00000431889 SLCO2B1O94956 709 aa13.64□□□□□ -0.23
SMARCE1-205ENST00000431889 VAPBO95292 243 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms