RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 LCP2Q13094 533 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 PRKAA1Q13131 559 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 RCN2Q14257 317 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 FASTKQ14296 549 aaKnown RBP7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 PCBP2Q15366 365 aaKnown RBP eCLIP7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 RBBP7Q16576 425 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 CYP2A13Q16696 494 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 ZNF678Q5SXM1 525 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 PRAMEF13Q5VWM6 474 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 ATG16L1Q676U5 607 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 KLHL35Q6PF15 583 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 SUSD1Q6UWL2 747 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 GOLGA7Q7Z5G4 137 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 THOC6Q86W42 341 aaKnown RBP7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 OOSP2Q86WS3 158 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 C17orf82Q86X59 251 aaPredicted RBP7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 MYLK4Q86YV6 388 aaPredicted RBP7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 TEX9Q8N6V9 391 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 Q8N9G6 341 aaPredicted RBP7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 LINC01555Q8NAE3 123 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 OR2L8Q8NGY9 312 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 OR56A3Q8NH54 315 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 RAB3IL1Q8TBN0 382 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 ZNF483Q8TF39 744 aaPredicted RBP7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 ZFPM2Q8WW38 1151 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 CKAP2Q8WWK9 683 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 NAT6Q93015 286 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 CCDC74AQ96AQ1 378 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 NSUN5Q96P11 429 aaKnown RBP7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 MENTQ9BUN1 341 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 ACAT2Q9BWD1 397 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 GATA5Q9BWX5 397 aaPredicted RBP7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 TBC1D10AQ9BXI6 508 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 SYNDIG1Q9H7V2 258 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 UCK1Q9HA47 277 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 PRM3Q9NNZ6 103 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 SEMA4BQ9NPR2 832 aaPredicted RBP7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 RXFP3Q9NSD7 469 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 KCNK4Q9NYG8 393 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 OGFRQ9NZT2 677 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 LRIT1Q9P2V4 623 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 FTSJ1Q9UET6 329 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 TAC3Q9UHF0 121 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 PCTPQ9UKL6 214 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 BTBD3Q9Y2F9 522 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 DYRK1BQ9Y463 629 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 PCDH15Q96QU1 1955 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 SDK1Q7Z5N4 2213 aa7.66□□□□□ -1.18
HMGA1P4-201ENST00000428643 PIPSLA2A3N6 862 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 FAM221BA6H8Z2 402 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 OR5K3A6NET4 321 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 C4orf47A7E2U8 309 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 ISM1B1AKI9 464 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 TMEM114B3SHH9 223 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 TCP11X1B4DZS4 312 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 BTN3A3O00478 584 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 E2F3O00716 465 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 GIPC1O14908 333 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 PPM1DO15297 605 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 DUX1O43812 170 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 CRCPO75575 148 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 CCNDBP1O95273 360 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 MLYCDO95822 493 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 PROS1P07225 676 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 DMDP11532 3685 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 EPB42P16452 691 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 AMD1P17707 334 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 POLR2CP19387 275 aaPredicted RBP7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 PSMB5P28074 263 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 GGT5P36269 586 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 CCR10P46092 362 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 CAPZBP47756 277 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 DUSP3P51452 185 aaPredicted RBP7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 EPHA4P54764 986 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 CDH13P55290 713 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 GNGT1P63211 74 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 NHLH1Q02575 133 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 CLCQ05315 142 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 BST1Q10588 318 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 CDC16Q13042 620 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 STX3Q13277 289 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 SLC14A1Q13336 389 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 GTF2H2Q13888 395 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 PROX2Q3B8N5 592 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 GON4LQ3T8J9 2241 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 AMZ1Q400G9 498 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 UNC50Q53HI1 259 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 IRGCQ6NXR0 463 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 GTF2H2CQ6P1K8 395 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 METTL2BQ6P1Q9 378 aaKnown RBP7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 GUSBP11Q6P575 273 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 FRMD7Q6ZUT3 714 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 FAM47EQ6ZV65 393 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 GPRIN3Q6ZVF9 776 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 RPS27LQ71UM5 84 aaKnown RBP7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 EFL1Q7Z2Z2 1120 aaKnown RBP7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 ZNF438Q7Z4V0 828 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 NAXDQ8IW45 347 aa7.65□□□□□ -1.18
HMGA1P4-201ENST00000428643 FAM181AQ8N9Y4 354 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms