RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TGFB3P10600 412 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 UROSP10746 265 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 AZGP1P25311 298 aaKnown RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 DNAJA1P31689 397 aaKnown RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 RPP38P78345 283 aaKnown RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 ZNF33BQ06732 778 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 DBPQ10586 325 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 EIF4HQ15056 248 aaKnown RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 CARD16Q5EG05 197 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 PLET1Q6UQ28 207 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 KIAA1324Q6UXG2 1013 aaKnown RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 CEP68Q76N32 757 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 RASAL3Q86YV0 1011 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 ZDHHC21Q8IVQ6 265 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 OR8H3Q8N146 312 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 TMEM130Q8N3G9 435 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 ZNF680Q8NEM1 530 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 NLGN4YQ8NFZ3 816 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 TRPM4Q8TD43 1214 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 GGHQ92820 318 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 EXT2Q93063 718 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 MARC2Q969Z3 335 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 DACT3Q96B18 629 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 TSGA13Q96PP4 275 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 CATSPERBQ9H7T0 1116 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 KRT84Q9NSB2 600 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 VAPAQ9P0L0 249 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 SPASTQ9UBP0 616 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 A0A1W2PRG6 482 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 LRRC14BA6NHZ5 514 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 FAM220BPB1ANY3 271 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 AOC2O75106 756 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 MAFO75444 373 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 ANXA9O76027 345 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 RGS20O76081 388 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 CSF3P09919 207 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 CCNCP24863 283 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 BRCC3P46736 316 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 DAB2P98082 770 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 NPRL3Q12980 569 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 MRPL28Q13084 256 aaKnown RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 PFKFB4Q16877 469 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 C6orf136Q5SQH8 315 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 OTUD1Q5VV17 481 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 SAXO2Q658L1 398 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 ARHGAP17Q68EM7 881 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 OR2T5Q6IEZ7 315 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 SPNS2Q8IVW8 549 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 ZNF366Q8N895 744 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 OR2T29Q8NH02 315 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 C9orf43Q8TAL5 461 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 KIAA1143Q96AT1 154 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-206ENST00000428313 HRASLS5Q96KN8 279 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 TMPRSS4Q9NRS4 437 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 ZNF175Q9Y473 711 aa15.7■□□□□ 0.1
C9orf3-206ENST00000428313 MYL12BO14950 172 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 TNFRSF21O75509 655 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 WDR47O94967 919 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 SERPINA1P01009 418 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 JCHAINP01591 159 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 MTHFD2P13995 350 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 NCF1P14598 390 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-206ENST00000428313 MYL12AP19105 171 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 RPS3P23396 243 aaKnown RBP eCLIP15.69■□□□□ 0.1
C9orf3-206ENST00000428313 GMPSP49915 693 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-206ENST00000428313 KCNQ1P51787 676 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 AIF1P55008 147 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 CDKN2DP55273 166 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 RRAS2P62070 204 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-206ENST00000428313 CLLU1Q5K131 121 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 LRRC66Q68CR7 880 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 DEFB106AQ8N104 65 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 HERVK_113Q902F9 699 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 C18orf25Q96B23 403 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-206ENST00000428313 THUMPD3Q9BV44 507 aaKnown RBP15.69■□□□□ 0.1
C9orf3-206ENST00000428313 MIOSQ9NXC5 875 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 CMAHPQ9Y471 501 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 MICAL3Q7RTP6 2002 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 IQCMA0A1B0GVH7 501 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 PTHP01270 115 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 ITGB1P05556 798 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 LCP1P13796 627 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 EPHA2P29317 976 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 PCDH1Q08174 1060 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 IL31Q6EBC2 164 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 TMEM81Q6P7N7 255 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 ACOT1Q86TX2 421 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 NPWQ8N729 165 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 OR2T11Q8NH01 316 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 AKAP1Q92667 903 aaKnown RBP eCLIP15.69■□□□□ 0.1
C9orf3-206ENST00000428313 UBE2FQ969M7 185 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 NT5C3BQ969T7 300 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 CDT1Q9H211 546 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 TRIM45Q9H8W5 580 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-206ENST00000428313 EVA1BQ9NVM1 165 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 KIF17Q9P2E2 1029 aa15.69■□□□□ 0.1
C9orf3-206ENST00000428313 TNPO3Q9Y5L0 923 aaKnown RBP15.69■□□□□ 0.1
C9orf3-206ENST00000428313 RORCP51449 518 aa15.68■□□□□ 0.1
C9orf3-206ENST00000428313 GBX2P52951 348 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-206ENST00000428313 TPI1P60174 286 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms