RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 SLC13A3Q8WWT9 602 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 CYP2S1Q96SQ9 504 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 MAP3K3Q99759 626 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 RNF39Q9H2S5 420 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 IFT46Q9NQC8 304 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 EIF2B4Q9UI10 523 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 LRCH1Q9Y2L9 728 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 HAT1O14929 419 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 STATHP02808 62 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 FABP3P05413 133 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 PCSK2P16519 638 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 HNRNPH3P31942 346 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 RIPK1Q13546 671 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 UBAP2Q5T6F2 1119 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 CXorf57Q6NSI4 855 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 CLVS1Q8IUQ0 354 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 RADILQ96JH8 1075 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 WASF3Q9UPY6 502 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 A0A087WXM4 84 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 ARHGEF33A8MVX0 844 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 MAGEB17A8MXT2 336 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 TNFRSF11BO00300 401 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 TPST2O60704 377 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 NME6O75414 186 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 LRCH4O75427 683 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 LCA5LO95447 670 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 TSPAN5P62079 268 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 RUNX3Q13761 415 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 TMEM139Q8IV31 216 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 OR6K6Q8NGW6 343 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 TNFRSF25Q93038 417 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 RAB7BQ96AH8 199 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 COX4I2Q96KJ9 171 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 PPM1MQ96MI6 270 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 PSKH2Q96QS6 385 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 DAPK2Q9UIK4 370 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 SLC7A4O43246 635 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 PAK4O96013 591 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 RLN1P04808 185 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 PBX1P40424 430 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 BCAP31P51572 246 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 RBPJQ06330 500 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 SF3B4Q15427 424 aaKnown RBP eCLIP9.73□□□□□ -0.852e-8■■■■□ 20.6
CLTCL1-202ENST00000427926 C1orf94Q6P1W5 598 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 TMEM151BQ8IW70 566 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 AMER2Q8N7J2 671 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 PDPRQ8NCN5 879 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 PHOSPHO1Q8TCT1 267 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 PGM2Q96G03 612 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 CNTN3Q9P232 1028 aa9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 R3HDM2Q9Y2K5 976 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-202ENST00000427926 SRRM3A6NNA2 597 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 CYP11A1P05108 521 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 ACVR2AP27037 513 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 NTSR1P30989 418 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 IL12RB1P42701 662 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 CXCL12P48061 93 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 SP140Q13342 867 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 CHRNA6Q15825 494 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 TNFAIP8L2Q6P589 184 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 LYSMD3Q7Z3D4 306 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 ZNF100Q8IYN0 542 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 DNAAF1Q8NEP3 725 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 CST11Q9H112 138 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 ST6GALNAC4Q9H4F1 302 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 BRF2Q9HAW0 419 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 CLEC4AQ9UMR7 237 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 DHRS7Q9Y394 339 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 DHRS12A0PJE2 317 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 RRP8O43159 456 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 OR4F21O95013 312 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 AHSA1O95433 338 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 BDKRB1P46663 353 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 POU5F1Q01860 360 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 ROR2Q01974 943 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 WASHC2DQ5SRD0 308 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 LYSMD4Q5XG99 296 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 USP53Q70EK8 1073 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 YTHDF3Q7Z739 585 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 IQCHQ86VS3 1027 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 RAB43Q86YS6 212 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 LIX1LQ8IVB5 337 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 MREGQ8N565 214 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 RFKQ969G6 155 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 RCN3Q96D15 328 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 EGFL7Q9UHF1 273 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 TSPAN6O43657 245 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 CPNE3O75131 537 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 CBX6O95503 412 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 CPNE6O95741 557 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 TGFB1P01137 390 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 IRF2P14316 349 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 ADSSP30520 456 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 VBP1P61758 197 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 LRRC66Q68CR7 880 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 DUS1LQ6P1R4 473 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 PLXDC1Q8IUK5 500 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 DCAF4L2Q8NA75 395 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 OR52J3Q8NH60 311 aa9.72□□□□□ -0.85
CLTCL1-202ENST00000427926 C1GALT1C1Q96EU7 318 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms