RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 MED16Q9Y2X0 877 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 PCDHGA11Q9Y5H2 935 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 ALOX12P18054 663 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 CDKN2CP42773 168 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 YBEYP58557 167 aaPredicted RBP13.05□□□□□ -0.32
USP42-203ENST00000426246 RPS3AP61247 264 aaKnown RBP13.05□□□□□ -0.32
USP42-203ENST00000426246 ADNP2Q6IQ32 1131 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 SMYD1Q8NB12 490 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 NDNFQ8TB73 568 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 TAMM41Q96BW9 452 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 MYO19Q96H55 970 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 NLE1Q9NVX2 485 aaPredicted RBP13.05□□□□□ -0.32
USP42-203ENST00000426246 MAGEL2Q9UJ55 1249 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 PCDHB14Q9Y5E9 798 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 A0A0G2JN53 185 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 ACOX3O15254 700 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 PRLP01236 227 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 HMGA1P17096 107 aaKnown RBP13.05□□□□□ -0.32
USP42-203ENST00000426246 AZGP1P25311 298 aaKnown RBP13.05□□□□□ -0.32
USP42-203ENST00000426246 ALDH9A1P49189 494 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 GANABQ14697 944 aaKnown RBP13.05□□□□□ -0.32
USP42-203ENST00000426246 INAQ16352 499 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 ZNF697Q5TEC3 545 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 SUSD1Q6UWL2 747 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 RBM23Q86U06 439 aaKnown RBP13.05□□□□□ -0.32
USP42-203ENST00000426246 KLHDC8BQ8IXV7 354 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 CMTM8Q8IZV2 173 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 OR4K1Q8NGD4 311 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 TMEM121BQ9BXQ6 578 aaPredicted RBP13.05□□□□□ -0.32
USP42-203ENST00000426246 ASPSCR1Q9BZE9 553 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 INTS10Q9NVR2 710 aaKnown RBP13.05□□□□□ -0.32
USP42-203ENST00000426246 ARMC1Q9NVT9 282 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 BLOC1S6Q9UL45 172 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 CPQQ9Y646 472 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 MYOFQ9NZM1 2061 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 PIKFYVEQ9Y2I7 2098 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 IGLV3-10A0A075B6K4 115 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 GLYATL1P3A0A0U1RQE8 302 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 LOC100130705A0A1B0GUX0 176 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 TBX1O43435 398 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 CREG1O75629 220 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 PAPSS2O95340 614 aaPredicted RBP13.04□□□□□ -0.32
USP42-203ENST00000426246 HSD17B1P14061 328 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 HTR7P34969 479 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 POLD2P49005 469 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 EMP3P54852 163 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 TXNDC11Q6PKC3 985 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 ADAMTSL2Q86TH1 951 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 LRRC49Q8IUZ0 686 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 GTPBP3Q969Y2 492 aaKnown RBP13.04□□□□□ -0.32
USP42-203ENST00000426246 PSKH2Q96QS6 385 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 CLEC4EQ9ULY5 219 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 ALPK2Q86TB3 2170 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 MIA3Q5JRA6 1907 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 AP1G1O43747 822 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 LCKP06239 509 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 VEPH1Q14D04 833 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 NPTX1Q15818 432 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 CCDC85BQ15834 202 aaPredicted RBP13.04□□□□□ -0.32
USP42-203ENST00000426246 PTCHD3Q3KNS1 767 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 SETMARQ53H47 684 aaPredicted RBP13.04□□□□□ -0.32
USP42-203ENST00000426246 XKR6Q5GH73 641 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 TTC23Q5W5X9 447 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 NEK10Q6ZWH5 1172 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 CEP295NLQ96MC4 621 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 ARNT2Q9HBZ2 717 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 FAM118AQ9NWS6 357 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 ELOVL2Q9NXB9 296 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 SH3BP1Q9Y3L3 701 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 MYLKQ15746 1914 aa13.04□□□□□ -0.32
USP42-203ENST00000426246 WASH4PA8MWX3 477 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 CACNG3O60359 315 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 PDYNP01213 254 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 KRT6AP02538 564 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 KRT6BP04259 564 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 NUDT7P0C024 238 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ACRP10323 421 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 BCKDHAP12694 445 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 OGNP20774 298 aaKnown RBP13.03□□□□□ -0.32
USP42-203ENST00000426246 PREPP48147 710 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 KRT6CP48668 564 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ALDH3A2P51648 485 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 C6orf141Q5SZD1 244 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 FAM217AQ8IXS0 508 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 BORCS5Q969J3 196 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ZUFSPQ96AP4 578 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 COX4I2Q96KJ9 171 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 SCN3BQ9NY72 215 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 SLCO3A1Q9UIG8 710 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 C3orf18Q9UK00 162 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 PRKAB1Q9Y478 270 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 DENND4CQ5VZ89 1909 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 LILRB3O75022 631 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 DNTTP04053 509 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 CDH1P12830 882 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 CTSOP43234 321 aaPredicted RBP13.03□□□□□ -0.32
USP42-203ENST00000426246 ALDH3B2P48448 385 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 MLLT10P55197 1068 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 CHIT1Q13231 466 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 NAE1Q13564 534 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms