RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 LMNTD1Q8N9Z9 388 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 SLC38A9Q8NBW4 561 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 SEC14L1Q92503 715 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 SNF8Q96H20 258 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 KRT12Q99456 494 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 TRIM31Q9BZY9 425 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 ACTL8Q9H568 366 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 AKIRIN1Q9H9L7 192 aaPredicted RBP21.1■□□□□ 0.97
TRAF4-204ENST00000422344 SPATA7Q9P0W8 599 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 KLHL42Q9P2K6 505 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 PLCL2Q9UPR0 1127 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 AP1M2Q9Y6Q5 423 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 LRRK2Q5S007 2527 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 CDC14CA4D256 554 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 NDC80O14777 642 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 ZNF749O43361 778 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 MATN4O95460 622 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 CATP04040 527 aaKnown RBP21.09■□□□□ 0.97
TRAF4-204ENST00000422344 ERVK-10P10266 1014 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 PTPN4P29074 926 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 CASQ1P31415 396 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 ITGA8P53708 1063 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 POLE2P56282 527 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 ARL4CP56559 192 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 HIF1AQ16665 826 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 CCSMST1Q4G0I0 132 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 MSS51Q4VC12 460 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 FAM20CQ8IXL6 584 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 APOBEC4Q8WW27 367 aaKnown RBP21.09■□□□□ 0.97
TRAF4-204ENST00000422344 CFAP36Q96G28 342 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 CHST8Q9H2A9 424 aa21.09■□□□□ 0.97
TRAF4-204ENST00000422344 PPANQ9NQ55 473 aaKnown RBP21.09■□□□□ 0.97
TRAF4-204ENST00000422344 EFCAB8A8MWE9 144 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 VPS26AO75436 327 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 HAUS5O94927 633 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 FKBP9O95302 570 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 AGXTP21549 392 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 KCNAB2Q13303 367 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 CUL1Q13616 776 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 HP1BP3Q5SSJ5 553 aaPredicted RBP21.08■□□□□ 0.97
TRAF4-204ENST00000422344 HIBCHQ6NVY1 386 aaPredicted RBP21.08■□□□□ 0.97
TRAF4-204ENST00000422344 ZNF549Q6P9A3 640 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 NEK10Q6ZWH5 1172 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 SYTL1Q8IYJ3 562 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 C2CD4AQ8NCU7 369 aaPredicted RBP21.08■□□□□ 0.97
TRAF4-204ENST00000422344 INPP5DQ92835 1189 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 CERS2Q96G23 380 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 GPR21Q99679 349 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 PCMTD2Q9NV79 361 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 ZC3H7BQ9UGR2 993 aaKnown RBP21.08■□□□□ 0.97
TRAF4-204ENST00000422344 CHMP2BQ9UQN3 213 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 POLHQ9Y253 713 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 FARSAQ9Y285 508 aaKnown RBP21.08■□□□□ 0.97
TRAF4-204ENST00000422344 KLHL20Q9Y2M5 609 aa21.08■□□□□ 0.97
TRAF4-204ENST00000422344 FANCGO15287 622 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 ZSCAN9O15535 394 aaPredicted RBP21.07■□□□□ 0.96
TRAF4-204ENST00000422344 PSIP1O75475 530 aaKnown RBP21.07■□□□□ 0.96
TRAF4-204ENST00000422344 SEC31AO94979 1220 aaKnown RBP21.07■□□□□ 0.96
TRAF4-204ENST00000422344 RECKO95980 971 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 ENO3P13929 434 aaPredicted RBP21.07■□□□□ 0.96
TRAF4-204ENST00000422344 RORAP35398 523 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 ELK3P41970 407 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 UGT3A1Q6NUS8 523 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 TLDC1Q6P9B6 456 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 SYVN1Q86TM6 617 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 C17orf53Q8N3J3 647 aaPredicted RBP21.07■□□□□ 0.96
TRAF4-204ENST00000422344 DNAJC22Q8N4W6 341 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 OR9A1PQ8NGU1 263 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 GIMAP7Q8NHV1 300 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 HMGCLL1Q8TB92 370 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 LRRC39Q96DD0 335 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 RUFY1Q96T51 708 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 SLC30A3Q99726 388 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 DPH2Q9BQC3 489 aaPredicted RBP21.07■□□□□ 0.96
TRAF4-204ENST00000422344 AARSD1Q9BTE6 412 aaKnown RBP21.07■□□□□ 0.96
TRAF4-204ENST00000422344 SPRTNQ9H040 489 aaPredicted RBP21.07■□□□□ 0.96
TRAF4-204ENST00000422344 TRMT6Q9UJA5 497 aaKnown RBP21.07■□□□□ 0.96
TRAF4-204ENST00000422344 DHRS7Q9Y394 339 aa21.07■□□□□ 0.96
TRAF4-204ENST00000422344 KRT87PA6NCN2 255 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 ZNF839A8K0R7 811 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 ARHGEF33A8MVX0 844 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 C9J4A7 227 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 MPC1LP0DKB6 136 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 CBSLP0DN79 551 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 CBSP35520 551 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 GABRA4P48169 554 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 CARSP49589 748 aaKnown RBP21.06■□□□□ 0.96
TRAF4-204ENST00000422344 RPS18P62269 152 aaKnown RBP21.06■□□□□ 0.96
TRAF4-204ENST00000422344 PTCHD3Q3KNS1 767 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 ZC3H12BQ5HYM0 836 aaKnown RBP21.06■□□□□ 0.96
TRAF4-204ENST00000422344 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.06■□□□□ 0.96
TRAF4-204ENST00000422344 ZNF517Q6ZMY9 492 aaPredicted RBP21.06■□□□□ 0.96
TRAF4-204ENST00000422344 KIAA0408Q6ZU52 694 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 IGDCC3Q8IVU1 814 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 ZNF655Q8N720 491 aaPredicted RBP21.06■□□□□ 0.96
TRAF4-204ENST00000422344 BBOF1Q8ND07 529 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 DENND1AQ8TEH3 1009 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 PWWP2AQ96N64 755 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 NDC1Q9BTX1 674 aa21.06■□□□□ 0.96
TRAF4-204ENST00000422344 EPN3Q9H201 632 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms