RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 KCNAB2Q13303 367 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 PABPC1LQ4VXU2 614 aaKnown RBP13□□□□□ -0.33
MCF2L-213ENST00000421756 PDCD4Q53EL6 469 aaKnown RBP13□□□□□ -0.33
MCF2L-213ENST00000421756 GRAMD4Q6IC98 578 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 HACD2Q6Y1H2 254 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 C2orf15Q8WU43 125 aaKnown RBP13□□□□□ -0.33
MCF2L-213ENST00000421756 OSCP1Q8WVF1 389 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 SH3KBP1Q96B97 665 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 PAWRQ96IZ0 340 aaKnown RBP13□□□□□ -0.33
MCF2L-213ENST00000421756 TMEM175Q9BSA9 504 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 REXO4Q9GZR2 422 aaKnown RBP13□□□□□ -0.33
MCF2L-213ENST00000421756 EPS8L2Q9H6S3 715 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 NTN4Q9HB63 628 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 PRAMEF4O60810 478 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 SERPIND1P05546 499 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 THRBP10828 461 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 SMN1Q16637 294 aaKnown RBP13□□□□□ -0.33
MCF2L-213ENST00000421756 PRAMEF9Q5VWM5 478 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 PDE12Q6L8Q7 609 aaKnown RBP13□□□□□ -0.33
MCF2L-213ENST00000421756 GPR180Q86V85 440 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 SLC39A11Q8N1S5 342 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 TOP1MTQ969P6 601 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 GALNT8Q9NY28 637 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 SLC25A13Q9UJS0 675 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 BAG5Q9UL15 447 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 PCDHGA8Q9Y5G5 932 aa13□□□□□ -0.33
MCF2L-213ENST00000421756 E7EQ34 232 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 M0R129 80 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 SH3BP5O60239 455 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 NOL3O60936 208 aaKnown RBP12.99□□□□□ -0.33
MCF2L-213ENST00000421756 RASAL1O95294 804 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 PENKP01210 267 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-213ENST00000421756 EPHA2P29317 976 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 OR1E2P47887 323 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 ERVFC1P60507 584 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 SLC36A3Q495N2 470 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 MPPE1Q53F39 396 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 TRMT11Q7Z4G4 463 aaKnown RBP12.99□□□□□ -0.33
MCF2L-213ENST00000421756 NECAB2Q7Z6G3 386 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 TMPRSS11BQ86T26 416 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 ZC3H7AQ8IWR0 971 aaKnown RBP12.99□□□□□ -0.33
MCF2L-213ENST00000421756 MSRB3Q8IXL7 192 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 ELMOD1Q8N336 334 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 IL17FQ96PD4 163 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 TSEN34Q9BSV6 310 aaKnown RBP12.99□□□□□ -0.33
MCF2L-213ENST00000421756 BRINP2Q9C0B6 783 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 OARD1Q9Y530 152 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 BACE2Q9Y5Z0 518 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 MYO10Q9HD67 2058 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 TGFB1P01137 390 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 PON2Q15165 354 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 TPRG1Q6ZUI0 275 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 PIWIL3Q7Z3Z3 882 aaKnown RBP12.99□□□□□ -0.33
MCF2L-213ENST00000421756 SFTPA1Q8IWL2 248 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 EZH1Q92800 747 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-213ENST00000421756 ZSWIM3Q96MP5 696 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 SEZ6LQ9BYH1 1024 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 RBM38Q9H0Z9 239 aaKnown RBP12.99□□□□□ -0.33
MCF2L-213ENST00000421756 FAM83DQ9H4H8 585 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 MRGBPQ9NV56 204 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 SPASTQ9UBP0 616 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 MOSPD1Q9UJG1 213 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 ACSL6Q9UKU0 697 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 PPT2Q9UMR5 302 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 BRWD1Q9NSI6 2320 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 CREG1O75629 220 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 PRR35P0CG20 571 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 JAK1P23458 1154 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 EEFSECP57772 596 aaKnown RBP12.99□□□□□ -0.33
MCF2L-213ENST00000421756 PCBP2Q15366 365 aaKnown RBP eCLIP12.99□□□□□ -0.333e-8■■■■■ 33.9
MCF2L-213ENST00000421756 TCEAL5Q5H9L2 206 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 SLC39A5Q6ZMH5 540 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 CFAP206Q8IYR0 622 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 ATG16L2Q8NAA4 619 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 MCOLN3Q8TDD5 553 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 FATE1Q969F0 183 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 KCTD5Q9NXV2 234 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 NDUFA13Q9P0J0 144 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 MAGEL2Q9UJ55 1249 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 PCDHGA11Q9Y5H2 935 aa12.99□□□□□ -0.33
MCF2L-213ENST00000421756 ACPPP15309 386 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 MATN1P21941 496 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 VIPR2P41587 438 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 PSMD8P48556 350 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 GRASPQ7Z6J2 395 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-213ENST00000421756 SLC43A3Q8NBI5 491 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 SPPL2AQ8TCT8 520 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 OTUB1Q96FW1 271 aaPredicted RBP12.98□□□□□ -0.33
MCF2L-213ENST00000421756 SORBS1Q9BX66 1292 aaKnown RBP12.98□□□□□ -0.33
MCF2L-213ENST00000421756 SLC32A1Q9H598 525 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 TMPRSS11EQ9UL52 423 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 BTBD3Q9Y2F9 522 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 PCDHB3Q9Y5E6 796 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 LATO43561 262 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 C1SP09871 688 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 RAP2AP10114 183 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 ENGP17813 658 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 SDC1P18827 310 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 LRRC74AQ0VAA2 488 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms