RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 TAP2Q03519 686 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 NAE1Q13564 534 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 ARHGAP19Q14CB8 494 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 CCDC157Q569K6 752 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 HSP90B2PQ58FF3 399 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 LRRC56Q8IYG6 542 aaPredicted RBP15.2■□□□□ 0.02
DDX55-203ENST00000421670 PTGR2Q8N8N7 351 aaPredicted RBP15.2■□□□□ 0.02
DDX55-203ENST00000421670 AHCYL2Q96HN2 611 aaKnown RBP15.2■□□□□ 0.02
DDX55-203ENST00000421670 PKNOX2Q96KN3 472 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 ZMYND15Q9H091 742 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 SYNDIG1Q9H7V2 258 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 HRASLS2Q9NWW9 162 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 OR6C2Q9NZP2 312 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 FAM221BA6H8Z2 402 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 OR5K3A6NET4 321 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 LRRC14BA6NHZ5 514 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 TM9SF1O15321 606 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 TNFSF14O43557 240 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 DUX1O43812 170 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 KLK8O60259 260 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 DLX3O60479 287 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 ZWINTO95229 277 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 SIX3O95343 332 aaPredicted RBP15.19■□□□□ 0.02
DDX55-203ENST00000421670 RPLP0P05388 317 aaKnown RBP15.19■□□□□ 0.02
DDX55-203ENST00000421670 MYL2P10916 166 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 TAC1P20366 129 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 CSF2RBP32927 897 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 GDF5P43026 501 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 ETV4P43268 484 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 HSPA7P48741 367 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 HNMTP50135 292 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 PCLAFQ15004 111 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 SETDB1Q15047 1291 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 SULT1C3Q6IMI6 304 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 ZYG11AQ6WRX3 759 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 OOSP2Q86WS3 158 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 MGARPQ8TDB4 240 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 ATL1Q8WXF7 558 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 MECRQ9BV79 373 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 ACAT2Q9BWD1 397 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 MED4Q9NPJ6 270 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 CCDC177Q9NQR7 707 aaPredicted RBP15.19■□□□□ 0.02
DDX55-203ENST00000421670 ACSS2Q9NR19 701 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 COPG2Q9UBF2 871 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 PTBP2Q9UKA9 531 aaKnown RBP15.19■□□□□ 0.02
DDX55-203ENST00000421670 SPTBN4Q9H254 2564 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 A0A1W2PPV9 198 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 A0A1W2PQM1 296 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 PIPSLA2A3N6 862 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 CD1CP29017 333 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 HSD17B2P37059 387 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 SLC6A12P48065 614 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 ALDH18A1P54886 795 aaKnown RBP15.19■□□□□ 0.02
DDX55-203ENST00000421670 CCL7P80098 99 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 GPLD1P80108 840 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 TRIP6Q15654 476 aaKnown RBP15.19■□□□□ 0.02
DDX55-203ENST00000421670 PTCHD3Q3KNS1 767 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 CDKL4Q5MAI5 379 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 TCAIMQ8N3R3 496 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 HMGCLL1Q8TB92 370 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 RDH11Q8TC12 318 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 SMPDL3AQ92484 453 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 NCSTNQ92542 709 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 TOR4AQ9NXH8 423 aa15.19■□□□□ 0.02
DDX55-203ENST00000421670 CDV3Q9UKY7 258 aaKnown RBP15.19■□□□□ 0.02
DDX55-203ENST00000421670 ATXN7L1Q9ULK2 861 aaPredicted RBP15.19■□□□□ 0.02
DDX55-203ENST00000421670 ZNF839A8K0R7 811 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 ISM1B1AKI9 464 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 TM4SF5O14894 197 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 IPO13O94829 963 aaKnown RBP15.18■□□□□ 0.02
DDX55-203ENST00000421670 WDR47O94967 919 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 GP1BAP07359 652 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 CPA3P15088 417 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 ATP5F1P24539 256 aaPredicted RBP15.18■□□□□ 0.02
DDX55-203ENST00000421670 EEF1DP29692 281 aaKnown RBP15.18■□□□□ 0.02
DDX55-203ENST00000421670 GFERP55789 205 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 YBX1P67809 324 aaKnown RBP15.18■□□□□ 0.02
DDX55-203ENST00000421670 NFKB2Q00653 900 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 CFHR1Q03591 330 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 PRKAA1Q13131 559 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 GPS2Q13227 327 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 THEMIS2Q5TEJ8 643 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 IRGCQ6NXR0 463 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 KLHL35Q6PF15 583 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 USP53Q70EK8 1073 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 RPS27LQ71UM5 84 aaKnown RBP15.18■□□□□ 0.02
DDX55-203ENST00000421670 C10orf107Q8IVU9 208 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 FAM20CQ8IXL6 584 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 OR56A3Q8NH54 315 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 UBTD2Q8WUN7 234 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 MOCOSQ96EN8 888 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 TMEM237Q96Q45 408 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 NUDT22Q9BRQ3 303 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 SLC32A1Q9H598 525 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 CNOT10Q9H9A5 744 aaKnown RBP15.18■□□□□ 0.02
DDX55-203ENST00000421670 INTS7Q9NVH2 962 aaKnown RBP15.18■□□□□ 0.02
DDX55-203ENST00000421670 ACTR10Q9NZ32 417 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 TMEM9Q9P0T7 183 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 TAC3Q9UHF0 121 aa15.18■□□□□ 0.02
DDX55-203ENST00000421670 MID2Q9UJV3 735 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms