RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 OR4F3Q6IEY1 312 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 TMEM53Q6P2H8 277 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 ASB18Q6ZVZ8 466 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 GPRIN1Q7Z2K8 1008 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 CADM2Q8N3J6 435 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 SLC43A3Q8NBI5 491 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 BRSK1Q8TDC3 778 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 ELAC1Q9H777 363 aaKnown RBP12.62□□□□□ -0.39
SCN1B-202ENST00000415950 KCTD5Q9NXV2 234 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 PADI3Q9ULW8 664 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 DNAJC15Q9Y5T4 150 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 GMEB1Q9Y692 573 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 SCGNO76038 276 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 GBAP04062 536 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 ALPIP09923 528 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 RHOQP17081 205 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 RPL9P32969 192 aaKnown RBP12.62□□□□□ -0.39
SCN1B-202ENST00000415950 OR2B6P58173 313 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 TUBA4AP68366 448 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 TUSC3Q13454 348 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 MPPE1Q53F39 396 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 ZNF678Q5SXM1 525 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 GCNT6Q5T4J0 391 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 LCN1P1Q5VSP4 162 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 RTL4Q6ZR62 310 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 ZBTB2Q8N680 514 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 KBTBD7Q8WVZ9 684 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 TBX5Q99593 518 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 C14orf119Q9NWQ9 140 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 MIOSQ9NXC5 875 aa12.62□□□□□ -0.39
SCN1B-202ENST00000415950 MYH9P35579 1960 aaKnown RBP12.62□□□□□ -0.39
SCN1B-202ENST00000415950 MYO5AQ9Y4I1 1855 aaKnown RBP12.62□□□□□ -0.39
SCN1B-202ENST00000415950 TRAV19A0A0A6YYK7 116 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 FAM234BA2RU67 622 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 MEIS3P2A8K0S8 358 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 TULP3O75386 442 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 NME6O75414 186 aaPredicted RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 ATE1O95260 518 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 CAPN3P20807 821 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 CORO1AP31146 461 aaKnown RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 WASP42768 502 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 AP2S1P53680 142 aaPredicted RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 AIF1P55008 147 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 NCS1P62166 190 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 SOX4Q06945 474 aaPredicted RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 INCA1Q0VD86 236 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 PAFAH1B3Q15102 231 aaKnown RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 INTS6LQ5JSJ4 861 aaKnown RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 GALNTL5Q7Z4T8 443 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 SERPINA9Q86WD7 417 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 AHCYL2Q96HN2 611 aaKnown RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 BRINP2Q9C0B6 783 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 RNF38Q9H0F5 515 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 C8orf4Q9NR00 106 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 CCM2LQ9NUG4 571 aaPredicted RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 PFDN2Q9UHV9 154 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 MRPS23Q9Y3D9 190 aaKnown RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 LRRC37A3O60309 1634 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 OR1I1O60431 355 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 IFNA6P05013 189 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 FOXA1P55317 472 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 RPS14P62263 151 aaKnown RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 PHC1P78364 1004 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 FBXL22Q6P050 247 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 KIAA1324Q6UXG2 1013 aaKnown RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 PRR23CQ6ZRP0 262 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 FAM124AQ86V42 546 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 CILP2Q8IUL8 1156 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 OR8H3Q8N146 312 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 PDPRQ8NCN5 879 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 OR4F6Q8NGB9 312 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 PMM1Q92871 262 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 AP2M1Q96CW1 435 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 PCDHGB5Q9Y5G0 923 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 PCDHGA7Q9Y5G6 932 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 TAF1P21675 1872 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 RGPD5Q99666 1765 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 FUOMA2VDF0 154 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 MAGEB17A8MXT2 336 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 INMTO95050 263 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 CYP11A1P05108 521 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 FCER2P06734 321 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 DCDC1P59894 354 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 FPGSQ05932 587 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 NFATC3Q12968 1075 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 ANKRD26P1Q6NSI1 321 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 ZNF773Q6PK81 442 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 CHST4Q8NCG5 386 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 SNX33Q8WV41 574 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 DNASE1L2Q92874 299 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 C3orf14Q9HBI5 128 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 CRTAC1Q9NQ79 661 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 TIGARQ9NQ88 270 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 ASAH2Q9NR71 780 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 THG1LQ9NWX6 298 aaKnown RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 SPEF1Q9Y4P9 236 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 NUP205Q92621 2012 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms