RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PRPS2P11908 318 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 CYP4B1P13584 511 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 RPS14P62263 151 aaKnown RBP17.2■□□□□ 0.34
SDCBP-202ENST00000413219 TAF10Q12962 218 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 GTF2H3Q13889 308 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 ZNF404Q494X3 552 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 CFAP52Q8N1V2 620 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 EXOC2Q96KP1 924 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 DCSTAMPQ9H295 470 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 WWOXQ9NZC7 414 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 ABCG2Q9UNQ0 655 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 PCDHGC4Q9Y5F7 938 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 MN1Q10571 1320 aaPredicted RBP17.19■□□□□ 0.34
SDCBP-202ENST00000413219 PABPN1LA6NDY0 278 aaKnown RBP17.19■□□□□ 0.34
SDCBP-202ENST00000413219 METTL15A6NJ78 407 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 TMEM189-UBE2V1I3L0A0 370 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 MYCLP1P12525 358 aaPredicted RBP17.19■□□□□ 0.34
SDCBP-202ENST00000413219 HOXA9P31269 272 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 KRT20P35900 424 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 GJA8P48165 433 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 PIK3CGP48736 1102 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 PTRHD1Q6GMV3 140 aaKnown RBP17.19■□□□□ 0.34
SDCBP-202ENST00000413219 SERPINA11Q86U17 422 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 AKAP14Q86UN6 197 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 CHAC2Q8WUX2 184 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 RPL3LQ92901 407 aaKnown RBP17.19■□□□□ 0.34
SDCBP-202ENST00000413219 TESCQ96BS2 214 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 EGFL8Q99944 293 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 ADAM2Q99965 735 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 MOV10Q9HCE1 1003 aaKnown RBP17.19■□□□□ 0.34
SDCBP-202ENST00000413219 POLE4Q9NR33 117 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 IL17CQ9P0M4 197 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 KLHL3Q9UH77 587 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 RPS6KA6Q9UK32 745 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 IFT52Q9Y366 437 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 GREB1Q4ZG55 1949 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 AGAP5A6NIR3 686 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 H3BNC9 293 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 CA12O43570 354 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 ACSL4O60488 711 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 GUCA1CO95843 209 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 PTTG1O95997 202 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 ZNF24P17028 368 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 ZNF7P17097 686 aaPredicted RBP17.19■□□□□ 0.34
SDCBP-202ENST00000413219 DGKAP23743 735 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 ATAD3BQ5T9A4 648 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 ULK4Q96C45 1275 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 ERLEC1Q96DZ1 483 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 CLPBQ9H078 707 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 AASSQ9UDR5 926 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 FNDC3AQ9Y2H6 1198 aaKnown RBP17.19■□□□□ 0.34
SDCBP-202ENST00000413219 TESMINQ9Y4I5 508 aa17.19■□□□□ 0.34
SDCBP-202ENST00000413219 TRPM7Q96QT4 1865 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 ILVBLA1L0T0 632 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 ZBBXA8MT70 800 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 DPM1O60762 260 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 ZNF682O95780 498 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 KRT6AP02538 564 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 KRT6BP04259 564 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 FABP3P05413 133 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 SLC6A4P31645 630 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 KRT6CP48668 564 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 CLK1P49759 484 aaKnown RBP17.18■□□□□ 0.34
SDCBP-202ENST00000413219 IL1RL1Q01638 556 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 FAHD1Q6P587 224 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 ZNF598Q86UK7 904 aaKnown RBP17.18■□□□□ 0.34
SDCBP-202ENST00000413219 NXF2Q9GZY0 626 aaKnown RBP17.18■□□□□ 0.34
SDCBP-202ENST00000413219 RDH14Q9HBH5 336 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 ABCB10Q9NRK6 738 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 KRT84Q9NSB2 600 aa17.18■□□□□ 0.34
SDCBP-202ENST00000413219 PDP1Q9P0J1 537 aaPredicted RBP17.18■□□□□ 0.34
SDCBP-202ENST00000413219 MYO1GB0I1T2 1018 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 LOC730098B7Z3J9 87 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 WBP4O75554 376 aaKnown RBP17.17■□□□□ 0.34
SDCBP-202ENST00000413219 RFPL2O75678 378 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 EPB42P16452 691 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 KRR1Q13601 381 aaKnown RBP17.17■□□□□ 0.34
SDCBP-202ENST00000413219 SMN1Q16637 294 aaKnown RBP17.17■□□□□ 0.34
SDCBP-202ENST00000413219 ERICH5Q6P6B1 374 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 TTC23LQ6PF05 361 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 HORMAD1Q86X24 394 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 CLHC1Q8NHS4 586 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 GPR152Q8TDT2 470 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 PYCR2Q96C36 320 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 YME1L1Q96TA2 773 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 RHNO1Q9BSD3 238 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 INPP5KQ9BT40 448 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 CIPCQ9C0C6 399 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 AASDHPPTQ9NRN7 309 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 TSR3Q9UJK0 312 aaKnown RBP17.17■□□□□ 0.34
SDCBP-202ENST00000413219 ZFP37Q9Y6Q3 630 aaPredicted RBP17.17■□□□□ 0.34
SDCBP-202ENST00000413219 EVPLLA8MZ36 301 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 AIREO43918 545 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 CLDN11O75508 207 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 LCKP06239 509 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 ZDHHC11BP0C7U3 371 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 GGT5P36269 586 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 KCNQ1P51787 676 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 ZNF45Q02386 682 aa17.17■□□□□ 0.34
SDCBP-202ENST00000413219 CCL14Q16627 93 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms